mm9_v1_chr1_+_45368443_45368526	39.9108	FOX{C1,C2}.p2	AK220558|Col3a1|12825|collagen, type III, alpha 1	AK013329|Col3a1|12825|collagen, type III, alpha 1	AK041115|Col3a1|12825|collagen, type III, alpha 1	AK048546|Col3a1|12825|collagen, type III, alpha 1	AK157762|Col3a1|12825|collagen, type III, alpha 1	AK159763|Col3a1|12825|collagen, type III, alpha 1	AK159920|Col3a1|12825|collagen, type III, alpha 1	AK160048|Col3a1|12825|collagen, type III, alpha 1	AK160107|Col3a1|12825|collagen, type III, alpha 1	AK160818|Col3a1|12825|collagen, type III, alpha 1	AK147542|Col3a1|12825|collagen, type III, alpha 1	AK159985|Col3a1|12825|collagen, type III, alpha 1	AK029212|Col3a1|12825|collagen, type III, alpha 1	BC052398|Col3a1|12825|collagen, type III, alpha 1	BC043089|Col3a1|12825|collagen, type III, alpha 1	AK031544|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr1_+_196765124_196765159	22.6205	FOX{C1,C2}.p2	S69293|Cd34|12490|CD34 antigen	BC066820|Cd34|12490|CD34 antigen	AK158452|Cd34|12490|CD34 antigen	S69299|Cd34|12490|CD34 antigen	S69301|Cd34|12490|CD34 antigen
mm9_v1_chr3_+_137949734_137949755	21.1224	FOX{C1,C2}.p2	M22611|Adh1|11522|alcohol dehydrogenase 1 (class I)
mm9_v1_chr11_+_28821585_28821724	20.9826	FOX{C1,C2}.p2	AK162532|Efemp1|216616|epidermal growth factor-containing fibulin-like extracellular matrix protein 1
mm9_v1_chr1_-_174228105_174228194	18.8524	FOX{C1,C2}.p2	BC036127|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK129212|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK147331|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK148775|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK161840|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK168703|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK052863|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK137602|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	AK164509|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide	NM_178405|Atp1a2|98660|ATPase, Na+/K+ transporting, alpha 2 polypeptide
mm9_v1_chr1_+_45368382_45368399	18.8028	FOX{C1,C2}.p2	NM_009930|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr6_-_83486194_83486260	18.4042	FOX{C1,C2}.p2	AK146631|Actg2|11468|actin, gamma 2, smooth muscle, enteric	AK168649|Actg2|11468|actin, gamma 2, smooth muscle, enteric	BC002042|Actg2|11468|actin, gamma 2, smooth muscle, enteric	NM_009610|Actg2|11468|actin, gamma 2, smooth muscle, enteric
mm9_v1_chr1_-_170362298_170362315	17.4229	FOX{C1,C2}.p2	AK045252|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK144346|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK144446|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr1_+_196765014_196765069	17.397	FOX{C1,C2}.p2	NM_001111059|Cd34|12490|CD34 antigen	NM_133654|Cd34|12490|CD34 antigen
mm9_v1_chr6_-_55124983_55125038	16.8579	FOX{C1,C2}.p2	M88694|Inmt|21743|indolethylamine N-methyltransferase	NM_009349|Inmt|21743|indolethylamine N-methyltransferase	BC013518|Inmt|21743|indolethylamine N-methyltransferase	AK013010|Inmt|21743|indolethylamine N-methyltransferase	AK002281|Inmt|21743|indolethylamine N-methyltransferase
mm9_v1_chr1_+_137737433_137737437	16.3307	FOX{C1,C2}.p2	L47553|Tnnt2|21956|troponin T2, cardiac	NM_001130176|Tnnt2|21956|troponin T2, cardiac
mm9_v1_chr19_+_23241546_23241602	16.1251	FOX{C1,C2}.p2	AK009928|Klf9|16601|Kruppel-like factor 9
mm9_v1_chr9_-_71440061_71440201	15.6864	FOX{C1,C2}.p2	AK132167|Gcom1|102371|GRINL1A complex locus	AK146889|Gcom1|102371|GRINL1A complex locus	BC139077|Gcom1|102371|GRINL1A complex locus	BC139078|Gcom1|102371|GRINL1A complex locus	NM_001033208|Gcom1|102371|GRINL1A complex locus
mm9_v1_chr4_-_61179982_61180020	15.095	FOX{C1,C2}.p2	X04115|Mup1|17840|major urinary protein 1
mm9_v1_chr11_-_55223449_55223485	14.6913	FOX{C1,C2}.p2	CT010306|Sparc|20692|secreted acidic cysteine rich glycoprotein
mm9_v1_chr4_-_60594496_60594530	14.2693	FOX{C1,C2}.p2	M27609|Mup1|17840|major urinary protein 1	X03524|Mup1|17840|major urinary protein 1
mm9_v1_chr12_-_105066203_105066249	14.2415	FOX{C1,C2}.p2	BC037008|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr4_-_60594469_60594490	14.1029	FOX{C1,C2}.p2	X04115|Mup1|17840|major urinary protein 1
mm9_v1_chr1_-_45460310_45460349	14.0839	FOX{C1,C2}.p2	BC043696|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr11_+_108256590_108256640	13.7747	FOX{C1,C2}.p2	Y11356|Apoh|11818|apolipoprotein H	NM_013475|Apoh|11818|apolipoprotein H	BC011037|Apoh|11818|apolipoprotein H	BC019811|Apoh|11818|apolipoprotein H	AK010926|Apoh|11818|apolipoprotein H	S70439|Apoh|11818|apolipoprotein H	BC053338|Apoh|11818|apolipoprotein H	D10056|Apoh|11818|apolipoprotein H
mm9_v1_chr4_-_49562400_49562417	13.4834	FOX{C1,C2}.p2	AK168997|Aldob|230163|aldolase B, fructose-bisphosphate
mm9_v1_chr6_+_4483741_4483796	13.4301	FOX{C1,C2}.p2	BC012438|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chr1_+_92100572_92100639	13.0492	FOX{C1,C2}.p2	AK031100|Cxcr7|12778|chemokine (C-X-C motif) receptor 7	NM_007722|Cxcr7|12778|chemokine (C-X-C motif) receptor 7	AF000236|Cxcr7|12778|chemokine (C-X-C motif) receptor 7	BC015254|Cxcr7|12778|chemokine (C-X-C motif) receptor 7
mm9_v1_chr1_+_196765079_196765114	11.746	FOX{C1,C2}.p2	AK044121|Cd34|12490|CD34 antigen	AK053874|Cd34|12490|CD34 antigen	AK051507|Cd34|12490|CD34 antigen	AK167329|Cd34|12490|CD34 antigen	AK167350|Cd34|12490|CD34 antigen	BC006607|Cd34|12490|CD34 antigen	AK089010|Cd34|12490|CD34 antigen
mm9_v1_chr1_-_79855209_79855213	11.7433	FOX{C1,C2}.p2	AK045954|Serpine2|20720|serine (or cysteine) peptidase inhibitor, clade E, member 2	AK047856|Serpine2|20720|serine (or cysteine) peptidase inhibitor, clade E, member 2	AK051332|Serpine2|20720|serine (or cysteine) peptidase inhibitor, clade E, member 2	AK159687|Serpine2|20720|serine (or cysteine) peptidase inhibitor, clade E, member 2	AK160700|Serpine2|20720|serine (or cysteine) peptidase inhibitor, clade E, member 2	AK164270|Serpine2|20720|serine (or cysteine) peptidase inhibitor, clade E, member 2	X70296|Serpine2|20720|serine (or cysteine) peptidase inhibitor, clade E, member 2
mm9_v1_chr1_-_79855177_79855208	11.7389	FOX{C1,C2}.p2	BC010675|Serpine2|20720|serine (or cysteine) peptidase inhibitor, clade E, member 2
mm9_v1_chr18_-_60769648_60769761	11.4789	FOX{C1,C2}.p2	AK129267|Synpo|104027|synaptopodin	AK141564|Synpo|104027|synaptopodin	NM_001109975|Synpo|104027|synaptopodin
mm9_v1_chr16_+_7069971_7070091	11.4009	FOX{C1,C2}.p2	AY659956|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	AY659957|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	AY659958|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chrX_+_98644445_98644450	10.8317	FOX{C1,C2}.p2	AK003906|Itgb1bp2|26549|integrin beta 1 binding protein 2	NM_013712|Itgb1bp2|26549|integrin beta 1 binding protein 2
mm9_v1_chrX_+_98644459_98644503	10.4976	FOX{C1,C2}.p2	BC030035|Itgb1bp2|26549|integrin beta 1 binding protein 2	AF140691|Itgb1bp2|26549|integrin beta 1 binding protein 2
mm9_v1_chr7_+_149628285_149628372	10.074	FOX{C1,C2}.p2	J04992|Tnni2|21953|troponin I, skeletal, fast 2	NM_009405|Tnni2|21953|troponin I, skeletal, fast 2
mm9_v1_chr12_-_104976382_104976400	9.96724	FOX{C1,C2}.p2	NM_009244|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr19_+_40164158_40164224	9.88218	FOX{C1,C2}.p2	NM_001167875|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50	NM_001167877|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50	NM_134144|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50	BC051050|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50	BC011222|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50	AY206873|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50	AK149466|Cyp2c50|107141|cytochrome P450, family 2, subfamily c, polypeptide 50
mm9_v1_chr4_-_49562319_49562386	9.79844	FOX{C1,C2}.p2	BC026577|Aldob|230163|aldolase B, fructose-bisphosphate	BC034172|Aldob|230163|aldolase B, fructose-bisphosphate	BC034173|Aldob|230163|aldolase B, fructose-bisphosphate	BC022113|Aldob|230163|aldolase B, fructose-bisphosphate	BC034171|Aldob|230163|aldolase B, fructose-bisphosphate	BC036130|Aldob|230163|aldolase B, fructose-bisphosphate	BC016435|Aldob|230163|aldolase B, fructose-bisphosphate	BC036131|Aldob|230163|aldolase B, fructose-bisphosphate	BC036132|Aldob|230163|aldolase B, fructose-bisphosphate	BC036133|Aldob|230163|aldolase B, fructose-bisphosphate	NM_144903|Aldob|230163|aldolase B, fructose-bisphosphate	BC030724|Aldob|230163|aldolase B, fructose-bisphosphate	BC024112|Aldob|230163|aldolase B, fructose-bisphosphate	BC024056|Aldob|230163|aldolase B, fructose-bisphosphate	BC030725|Aldob|230163|aldolase B, fructose-bisphosphate	BC034169|Aldob|230163|aldolase B, fructose-bisphosphate	AK149598|Aldob|230163|aldolase B, fructose-bisphosphate	AK167566|Aldob|230163|aldolase B, fructose-bisphosphate	AK168600|Aldob|230163|aldolase B, fructose-bisphosphate	AK149395|Aldob|230163|aldolase B, fructose-bisphosphate	AK167334|Aldob|230163|aldolase B, fructose-bisphosphate	AK135385|Aldob|230163|aldolase B, fructose-bisphosphate
mm9_v1_chr1_+_21230683_21230717	9.61482	FOX{C1,C2}.p2	AK014076|Gsta3|14859|glutathione S-transferase, alpha 3	AK149543|Gsta3|14859|glutathione S-transferase, alpha 3
mm9_v1_chr12_-_105101768_105101807	9.2159	FOX{C1,C2}.p2	BC057984|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A
mm9_v1_chr9_-_50554613_50554673	8.76683	FOX{C1,C2}.p2	AK007929|2310030G06Rik|66952|RIKEN cDNA 2310030G06 gene	AK011526|2310030G06Rik|66952|RIKEN cDNA 2310030G06 gene	BC027409|2310030G06Rik|66952|RIKEN cDNA 2310030G06 gene	NM_025865|2310030G06Rik|66952|RIKEN cDNA 2310030G06 gene	AK009541|2310030G06Rik|66952|RIKEN cDNA 2310030G06 gene	AK007611|2310030G06Rik|66952|RIKEN cDNA 2310030G06 gene
mm9_v1_chr5_-_77543903_77543908	8.70865	FOX{C1,C2}.p2	AK004798|Hopx|74318|HOP homeobox	AK009007|Hopx|74318|HOP homeobox
mm9_v1_chr12_-_105143108_105143185	8.4316	FOX{C1,C2}.p2	BC021325|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	NM_009245|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C
mm9_v1_chr15_-_78236262_78236306	8.38775	FOX{C1,C2}.p2	CT010210|Tst|22117|thiosulfate sulfurtransferase, mitochondrial	U35741|Tst|22117|thiosulfate sulfurtransferase, mitochondrial	BC005644|Tst|22117|thiosulfate sulfurtransferase, mitochondrial	NM_009437|Tst|22117|thiosulfate sulfurtransferase, mitochondrial	AK003953|Tst|22117|thiosulfate sulfurtransferase, mitochondrial
mm9_v1_chr1_+_166726827_166726862	8.27424	FOX{C1,C2}.p2	BC046420|Dpt|56429|dermatopontin	AF143374|Dpt|56429|dermatopontin	NM_019759|Dpt|56429|dermatopontin
mm9_v1_chr3_-_122737855_122737904	8.20487	FOX{C1,C2}.p2	AK003634|Myoz2|59006|myozenin 2	AJ252148|Myoz2|59006|myozenin 2	BC024360|Myoz2|59006|myozenin 2	AY013296|Myoz2|59006|myozenin 2	AK085927|Myoz2|59006|myozenin 2	NM_021503|Myoz2|59006|myozenin 2
mm9_v1_chr1_-_71686889_71687012	8.10155	FOX{C1,C2}.p2	AK147249|Fn1|14268|fibronectin 1
mm9_v1_chr6_-_92851434_92851434	7.80638	FOX{C1,C2}.p2	NM_175314|Adamts9|101401|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9
mm9_v1_chr15_-_76853069_76853216	7.76084	FOX{C1,C2}.p2	AK137456|Mb|17189|myoglobin	NM_001164048|Mb|17189|myoglobin	NM_001164047|Mb|17189|myoglobin
mm9_v1_chr9_-_101101334_101101402	7.69465	FOX{C1,C2}.p2	AK169510|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha	AK132175|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha	NM_172144|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha
mm9_v1_chr2_-_10052196_10052339	7.68059	FOX{C1,C2}.p2	AK133782|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2	BC034341|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2	X70392|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2	NM_010582|Itih2|16425|inter-alpha trypsin inhibitor, heavy chain 2
mm9_v1_chr7_-_116760660_116760660	7.58216	FOX{C1,C2}.p2	NM_001001326|St5|76954|suppression of tumorigenicity 5	NM_029811|St5|76954|suppression of tumorigenicity 5
mm9_v1_chr11_+_32183671_32183700	7.57315	FOX{C1,C2}.p2	AK002222|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010937|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011025|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011055|Hba-a1|15122|hemoglobin alpha, adult chain 1	NM_008218|Hba-a1|15122|hemoglobin alpha, adult chain 1	L75940|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK003077|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK005434|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010422|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010923|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK010927|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK010933|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK010938|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010987|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011018|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011023|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011028|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011030|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK011073|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK011076|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011121|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK012329|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK012348|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK012755|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK019138|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK028173|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK076068|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK171893|Hba-a1|15122|hemoglobin alpha, adult chain 1	NM_001083955|Hba-a2|110257|hemoglobin alpha, adult chain 2	M10466|Hba-a2|110257|hemoglobin alpha, adult chain 2	BC043020|Hba-a1|15122|hemoglobin alpha, adult chain 1	M26895|Hba-a2|110257|hemoglobin alpha, adult chain 2
mm9_v1_chr11_+_67611772_67611789	7.496	FOX{C1,C2}.p2	NM_001013013|Dhrs7c|68460|dehydrogenase/reductase (SDR family) member 7C	AK003267|Dhrs7c|68460|dehydrogenase/reductase (SDR family) member 7C	BC039565|Dhrs7c|68460|dehydrogenase/reductase (SDR family) member 7C
mm9_v1_chr13_+_42776161_42776182	7.41629	FOX{C1,C2}.p2	AK047654|Phactr1|218194|phosphatase and actin regulator 1	AY993932|Phactr1|218194|phosphatase and actin regulator 1
mm9_v1_chr2_-_79748552_79748555	7.25304	FOX{C1,C2}.p2	AK014810|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	AF159298|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	AY845863|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	AY845864|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	NM_001009978|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	NM_001009979|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent
mm9_v1_chr15_+_54964990_54964990	7.16701	FOX{C1,C2}.p2	AK139888|Deptor|97998|DEP domain containing MTOR-interacting protein	NM_001037937|Deptor|97998|DEP domain containing MTOR-interacting protein
mm9_v1_chr18_+_37821598_37821598	7.15219	FOX{C1,C2}.p2	AY013792|Pcdhga1|93709|protocadherin gamma subfamily A, 1	NM_033584|Pcdhga1|93709|protocadherin gamma subfamily A, 1
mm9_v1_chr3_+_94928435_94928438	6.83065	FOX{C1,C2}.p2	AK144408|Tmod4|50874|tropomodulin 4	AK144535|Tmod4|50874|tropomodulin 4	NM_016712|Tmod4|50874|tropomodulin 4
mm9_v1_chr12_-_105101825_105101829	6.80714	FOX{C1,C2}.p2	NM_009243|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A
mm9_v1_chr1_-_79855229_79855247	6.64107	FOX{C1,C2}.p2	NM_009255|Serpine2|20720|serine (or cysteine) peptidase inhibitor, clade E, member 2
mm9_v1_chr19_-_34952328_34952347	6.57957	FOX{C1,C2}.p2	BC023496|Pank1|75735|pantothenate kinase 1
mm9_v1_chr13_+_42775991_42775991	6.52185	FOX{C1,C2}.p2	NM_198419|Phactr1|218194|phosphatase and actin regulator 1
mm9_v1_chr19_-_44471675_44471892	6.5136	FOX{C1,C2}.p2	AK012370|Scd1|20249|stearoyl-Coenzyme A desaturase 1
mm9_v1_chr12_+_71008808_71008844	6.51321	FOX{C1,C2}.p2	AK140185|Atl1|73991|atlastin GTPase 1	AK046919|Atl1|73991|atlastin GTPase 1	BC050784|Atl1|73991|atlastin GTPase 1
mm9_v1_chr11_+_32196488_32196517	6.4857	FOX{C1,C2}.p2	AK002222|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010937|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011025|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011055|Hba-a1|15122|hemoglobin alpha, adult chain 1	NM_008218|Hba-a1|15122|hemoglobin alpha, adult chain 1	L75940|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK003077|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK005434|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010422|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010923|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK010927|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK010933|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK010938|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK010987|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011018|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011023|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011028|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011030|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK011073|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK011076|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK011121|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK012329|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK012348|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK012755|Hba-a1|15122|hemoglobin alpha, adult chain 1	AK019138|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK028173|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK076068|Hba-a2|110257|hemoglobin alpha, adult chain 2	AK171893|Hba-a1|15122|hemoglobin alpha, adult chain 1	NM_001083955|Hba-a2|110257|hemoglobin alpha, adult chain 2	M10466|Hba-a2|110257|hemoglobin alpha, adult chain 2	BC043020|Hba-a1|15122|hemoglobin alpha, adult chain 1	M26895|Hba-a2|110257|hemoglobin alpha, adult chain 2
mm9_v1_chr8_-_13494457_13494536	6.39877	FOX{C1,C2}.p2	BC005444|Gas6|14456|growth arrest specific 6	X59846|Gas6|14456|growth arrest specific 6	AK086187|Gas6|14456|growth arrest specific 6	NM_019521|Gas6|14456|growth arrest specific 6
mm9_v1_chr7_-_135073577_135073594	6.34307	FOX{C1,C2}.p2	AK078696|Prss8|76560|protease, serine, 8 (prostasin)
mm9_v1_chrX_+_54032858_54032889	6.28799	FOX{C1,C2}.p2	NM_001077362|Fhl1|14199|four and a half LIM domains 1
mm9_v1_chr1_+_21230664_21230669	6.27814	FOX{C1,C2}.p2	NM_001077353|Gsta3|14859|glutathione S-transferase, alpha 3	NM_010356|Gsta3|14859|glutathione S-transferase, alpha 3
mm9_v1_chr6_+_71149869_71149892	6.27266	FOX{C1,C2}.p2	AK131868|Fabp1|14080|fatty acid binding protein 1, liver	NM_017399|Fabp1|14080|fatty acid binding protein 1, liver	Y14660|Fabp1|14080|fatty acid binding protein 1, liver	BC009812|Fabp1|14080|fatty acid binding protein 1, liver
mm9_v1_chr5_-_146821173_146821199	6.22762	FOX{C1,C2}.p2	Y11995|Cyp3a25|56388|cytochrome P450, family 3, subfamily a, polypeptide 25	AF204959|Cyp3a25|56388|cytochrome P450, family 3, subfamily a, polypeptide 25	BC028855|Cyp3a25|56388|cytochrome P450, family 3, subfamily a, polypeptide 25	NM_019792|Cyp3a25|56388|cytochrome P450, family 3, subfamily a, polypeptide 25	AK149541|Cyp3a25|56388|cytochrome P450, family 3, subfamily a, polypeptide 25
mm9_v1_chr12_-_105101743_105101767	6.18877	FOX{C1,C2}.p2	BC011040|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC031707|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC037007|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC047128|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC049970|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	M75721|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	AK146619|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC057982|Serpina1a|20700|serine (or cysteine) peptidase inhibitor, clade A, member 1A	BC012874|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr13_-_41923709_41923740	5.91203	FOX{C1,C2}.p2	BC027755|9530008L14Rik|109254|RIKEN cDNA 9530008L14 gene
mm9_v1_chr12_-_105195097_105195135	5.90395	FOX{C1,C2}.p2	M75717|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	BC061176|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	NM_009247|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	AK004999|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E	AK135650|Serpina1e|20704|serine (or cysteine) peptidase inhibitor, clade A, member 1E
mm9_v1_chr18_-_70301202_70301243	5.83716	FOX{C1,C2}.p2	AK045312|Rab27b|80718|RAB27b, member RAS oncogene family	AK086987|Rab27b|80718|RAB27b, member RAS oncogene family	AK049854|Rab27b|80718|RAB27b, member RAS oncogene family	NM_001082553|Rab27b|80718|RAB27b, member RAS oncogene family
mm9_v1_chr19_-_34952377_34952406	5.799	FOX{C1,C2}.p2	AF200357|Pank1|75735|pantothenate kinase 1	AK050222|Pank1|75735|pantothenate kinase 1	NM_023792|Pank1|75735|pantothenate kinase 1
mm9_v1_chr19_-_5845001_5845012	5.79498	FOX{C1,C2}.p2	BC025215|Neat1|66961|nuclear paraspeckle assembly transcript 1 (non-protein coding)
mm9_v1_chr11_-_11798101_11798104	5.63786	FOX{C1,C2}.p2	BC060989|Ddc|13195|dopa decarboxylase
mm9_v1_chr7_-_135073508_135073550	5.56833	FOX{C1,C2}.p2	AK010640|Prss8|76560|protease, serine, 8 (prostasin)	AF188613|Prss8|76560|protease, serine, 8 (prostasin)
mm9_v1_chr8_-_48437701_48437701	5.56338	FOX{C1,C2}.p2	BC100572|Stox2|71069|storkhead box 2	BC100573|Stox2|71069|storkhead box 2	NM_175162|Stox2|71069|storkhead box 2
mm9_v1_chr16_+_34921598_34921714	5.44254	FOX{C1,C2}.p2	AY237727|Mylk|107589|myosin, light polypeptide kinase	BC045197|Mylk|107589|myosin, light polypeptide kinase	AK078556|Mylk|107589|myosin, light polypeptide kinase
mm9_v1_chr19_-_44472087_44472105	5.40834	FOX{C1,C2}.p2	AK078704|Scd1|20249|stearoyl-Coenzyme A desaturase 1
mm9_v1_chr10_-_76172218_76172292	5.29756	FOX{C1,C2}.p2	AK029428|Col6a1|12833|collagen, type VI, alpha 1	AK027944|Col6a1|12833|collagen, type VI, alpha 1
mm9_v1_chr16_+_7069927_7069947	5.26509	FOX{C1,C2}.p2	AF191501|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_183188|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr7_-_108025317_108025394	5.26391	FOX{C1,C2}.p2	AK033211|Arhgef17|207212|Rho guanine nucleotide exchange factor (GEF) 17
mm9_v1_chr3_-_130951398_130951434	5.2319	FOX{C1,C2}.p2	AK169238|Hadh|15107|hydroxyacyl-Coenzyme A dehydrogenase
mm9_v1_chr9_+_21397379_21397470	5.1204	FOX{C1,C2}.p2	AK088045|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	AK089121|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	BC025883|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	AK034762|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene
mm9_v1_chr11_-_11798138_11798148	4.97054	FOX{C1,C2}.p2	NM_001190448|Ddc|13195|dopa decarboxylase
mm9_v1_chr10_+_18189773_18189786	4.90746	FOX{C1,C2}.p2	BC030842|Nhsl1|215819|NHS-like 1	NM_001163592|Nhsl1|215819|NHS-like 1
mm9_v1_chr3_+_67868723_67868723	4.81453	FOX{C1,C2}.p2	EU163407|Schip1|30953|schwannomin interacting protein 1	EU163408|Schip1|30953|schwannomin interacting protein 1	NM_001113420|Schip1|30953|schwannomin interacting protein 1	NM_001113421|Schip1|30953|schwannomin interacting protein 1
mm9_v1_chr12_-_105143089_105143106	4.7364	FOX{C1,C2}.p2	BC031707|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC009818|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC010984|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC011041|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	M75720|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC021780|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C	BC024108|Serpina1c|20702|serine (or cysteine) peptidase inhibitor, clade A, member 1C
mm9_v1_chr15_+_97923019_97923019	4.73009	FOX{C1,C2}.p2	NM_001163488|Pfkm|18642|phosphofructokinase, muscle
mm9_v1_chr19_+_39361574_39361600	4.60436	FOX{C1,C2}.p2	NM_007815|Cyp2c29|13095|cytochrome P450, family 2, subfamily c, polypeptide 29	BC019908|Cyp2c29|13095|cytochrome P450, family 2, subfamily c, polypeptide 29	D17674|Cyp2c29|13095|cytochrome P450, family 2, subfamily c, polypeptide 29
mm9_v1_chr2_+_135883963_135884022	4.60102	FOX{C1,C2}.p2	AK018222|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene	AK045946|6330527O06Rik|76161|RIKEN cDNA 6330527O06 gene
mm9_v1_chr2_+_135567565_135567570	4.46164	FOX{C1,C2}.p2	AF332071|Plcb4|18798|phospholipase C, beta 4	AF332072|Plcb4|18798|phospholipase C, beta 4	NM_013829|Plcb4|18798|phospholipase C, beta 4	BC129883|Plcb4|18798|phospholipase C, beta 4
mm9_v1_chr1_-_174149963_174149971	4.44229	FOX{C1,C2}.p2	BC064057|Casq1|12372|calsequestrin 1	U93291|Casq1|12372|calsequestrin 1
mm9_v1_chr16_+_56477956_56478012	4.41612	FOX{C1,C2}.p2	AK086582|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014399|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014422|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014423|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_001014424|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	NM_178790|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK041192|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK043879|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AK051214|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	BC145388|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	BC150763|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190339|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190340|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190341|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190342|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein	AB190343|Abi3bp|320712|ABI gene family, member 3 (NESH) binding protein
mm9_v1_chr1_-_170362388_170362504	4.3907	FOX{C1,C2}.p2	NM_008783|Pbx1|18514|pre B-cell leukemia transcription factor 1	NM_183355|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr2_-_66622823_66622970	4.3443	FOX{C1,C2}.p2	BC145273|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha	NM_009135|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha	AK142964|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha
mm9_v1_chr6_+_47194393_47194453	4.3038	FOX{C1,C2}.p2	NM_025771|Cntnap2|66797|contactin associated protein-like 2	AK017341|Cntnap2|66797|contactin associated protein-like 2	AK013139|Cntnap2|66797|contactin associated protein-like 2	BC029826|Cntnap2|66797|contactin associated protein-like 2	BC103799|Cntnap2|66797|contactin associated protein-like 2
mm9_v1_chr5_+_136514548_136514570	4.08899	FOX{C1,C2}.p2	AK157647|Upk3b|100647|uroplakin 3B	AY233463|Upk3b|100647|uroplakin 3B	BC061224|Upk3b|100647|uroplakin 3B	AK042067|Upk3b|100647|uroplakin 3B
mm9_v1_chr19_+_40066913_40066929	3.96968	FOX{C1,C2}.p2	AK005017|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37	NM_010001|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37	BC057912|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37	AF047542|Cyp2c37|13096|cytochrome P450, family 2. subfamily c, polypeptide 37
mm9_v1_chrX_+_133242520_133242603	3.91185	FOX{C1,C2}.p2	BC083157|Tceal1|237052|transcription elongation factor A (SII)-like 1	BC011290|Tceal1|237052|transcription elongation factor A (SII)-like 1	NM_146236|Tceal1|237052|transcription elongation factor A (SII)-like 1
mm9_v1_chr1_-_89291303_89291307	3.79268	FOX{C1,C2}.p2	NM_001110227|Kcnj13|100040591|potassium inwardly-rectifying channel, subfamily J, member 13
mm9_v1_chr3_-_57098670_57098869	3.79074	FOX{C1,C2}.p2	L15429|Tm4sf1|17112|transmembrane 4 superfamily member 1	L15443|Tm4sf1|17112|transmembrane 4 superfamily member 1	AK133556|Tm4sf1|17112|transmembrane 4 superfamily member 1	AK077326|Tm4sf1|17112|transmembrane 4 superfamily member 1	AK164718|Tm4sf1|17112|transmembrane 4 superfamily member 1
mm9_v1_chr7_-_112748585_112748623	3.77807	FOX{C1,C2}.p2	U89889|Hpx|15458|hemopexin	BC011246|Hpx|15458|hemopexin	BC019901|Hpx|15458|hemopexin
mm9_v1_chr13_+_25035416_25035485	3.71832	FOX{C1,C2}.p2	AY081194|Gpld1|14756|glycosylphosphatidylinositol specific phospholipase D1	AK004957|Gpld1|14756|glycosylphosphatidylinositol specific phospholipase D1	BC019146|Gpld1|14756|glycosylphosphatidylinositol specific phospholipase D1	AY333960|Gpld1|14756|glycosylphosphatidylinositol specific phospholipase D1
mm9_v1_chr3_-_87067445_87067682	3.68047	FOX{C1,C2}.p2	AK034125|Fcrls|80891|Fc receptor-like S, scavenger receptor	NM_030707|Fcrls|80891|Fc receptor-like S, scavenger receptor	AF329486|Fcrls|80891|Fc receptor-like S, scavenger receptor	AB028174|Fcrls|80891|Fc receptor-like S, scavenger receptor	AK076123|Fcrls|80891|Fc receptor-like S, scavenger receptor	AY506556|Fcrls|80891|Fc receptor-like S, scavenger receptor	AY506557|Fcrls|80891|Fc receptor-like S, scavenger receptor	BC016551|Fcrls|80891|Fc receptor-like S, scavenger receptor	AF302046|Fcrls|80891|Fc receptor-like S, scavenger receptor
mm9_v1_chr3_-_90318178_90318313	3.66686	FOX{C1,C2}.p2	AK017279|S100a1|20193|S100 calcium binding protein A1	AK168822|S100a1|20193|S100 calcium binding protein A1	AK002721|S100a1|20193|S100 calcium binding protein A1	AF087687|S100a1|20193|S100 calcium binding protein A1	AK012578|S100a1|20193|S100 calcium binding protein A1	NM_011309|S100a1|20193|S100 calcium binding protein A1	BC005590|S100a1|20193|S100 calcium binding protein A1
mm9_v1_chr2_+_10075169_10075197	3.65077	FOX{C1,C2}.p2	AK140756|Itih5|209378|inter-alpha (globulin) inhibitor H5	NM_172471|Itih5|209378|inter-alpha (globulin) inhibitor H5	BC062196|Itih5|209378|inter-alpha (globulin) inhibitor H5
mm9_v1_chr5_-_130354822_130354958	3.61334	FOX{C1,C2}.p2	J03293|Phkg1|18682|phosphorylase kinase gamma 1	BC055102|Phkg1|18682|phosphorylase kinase gamma 1	NM_011079|Phkg1|18682|phosphorylase kinase gamma 1	AK079361|Phkg1|18682|phosphorylase kinase gamma 1
mm9_v1_chr14_-_65035722_65035811	3.59697	FOX{C1,C2}.p2	AK018338|Msra|110265|methionine sulfoxide reductase A
mm9_v1_chr7_-_112748624_112748633	3.54199	FOX{C1,C2}.p2	AK145928|Hpx|15458|hemopexin	NM_017371|Hpx|15458|hemopexin
mm9_v1_chr12_-_105011767_105011793	3.48187	FOX{C1,C2}.p2	M75718|Serpina1d|20703|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm9_v1_chr11_-_11798035_11798088	3.48163	FOX{C1,C2}.p2	AF012881|Ddc|13195|dopa decarboxylase	BC089594|Ddc|13195|dopa decarboxylase
mm9_v1_chr12_-_105011807_105011857	3.41494	FOX{C1,C2}.p2	NM_009246|Serpina1d|20703|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm9_v1_chr11_+_52202137_52202376	3.41041	FOX{C1,C2}.p2	AK217498|Vdac1|22333|voltage-dependent anion channel 1	AK210208|Vdac1|22333|voltage-dependent anion channel 1	AK215454|Vdac1|22333|voltage-dependent anion channel 1	AK207573|Vdac1|22333|voltage-dependent anion channel 1
mm9_v1_chr16_-_44016471_44016548	3.39776	FOX{C1,C2}.p2	BC037472|Gramd1c|207798|GRAM domain containing 1C	AK129016|Gramd1c|207798|GRAM domain containing 1C	AK035257|Gramd1c|207798|GRAM domain containing 1C	NM_153528|Gramd1c|207798|GRAM domain containing 1C
mm9_v1_chr7_+_88202481_88202485	3.3933	FOX{C1,C2}.p2	AF338872|Alpk3|116904|alpha-kinase 3	NM_054085|Alpk3|116904|alpha-kinase 3
mm9_v1_chr4_-_44096969_44097048	3.38172	FOX{C1,C2}.p2	AM697710|Gne|50798|glucosamine	BC015277|Gne|50798|glucosamine	BC051254|Gne|50798|glucosamine	AK136573|Gne|50798|glucosamine	NM_015828|Gne|50798|glucosamine
mm9_v1_chr17_+_75578120_75578285	3.37663	FOX{C1,C2}.p2	AK036047|Ltbp1|268977|latent transforming growth factor beta binding protein 1	NM_206958|Ltbp1|268977|latent transforming growth factor beta binding protein 1	AF280604|Ltbp1|268977|latent transforming growth factor beta binding protein 1
mm9_v1_chr12_-_105011795_105011804	3.36742	FOX{C1,C2}.p2	AK002537|Serpina1d|20703|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm9_v1_chr19_-_24299389_24299452	3.32987	FOX{C1,C2}.p2	AK028494|Tjp2|21873|tight junction protein 2
mm9_v1_chr12_-_104976324_104976338	3.29068	FOX{C1,C2}.p2	BC022109|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B	BC025445|Serpina1b|20701|serine (or cysteine) preptidase inhibitor, clade A, member 1B
mm9_v1_chr2_+_49921978_49921983	3.26428	FOX{C1,C2}.p2	NM_177139|Lypd6|320343|LY6/PLAUR domain containing 6	AK053620|Lypd6|320343|LY6/PLAUR domain containing 6
mm9_v1_chr6_+_4484651_4484672	3.26377	FOX{C1,C2}.p2	AK159120|Col1a2|12843|collagen, type I, alpha 2
mm9_v1_chr14_+_30822097_30822350	3.25149	FOX{C1,C2}.p2	NM_001136240|Chdh|218865|choline dehydrogenase	AK052715|Chdh|218865|choline dehydrogenase	AK087570|Chdh|218865|choline dehydrogenase	AK164042|Chdh|218865|choline dehydrogenase
mm9_v1_chr7_-_135073600_135073612	3.20637	FOX{C1,C2}.p2	BC003851|Prss8|76560|protease, serine, 8 (prostasin)	AB038244|Prss8|76560|protease, serine, 8 (prostasin)
mm9_v1_chr11_+_115626733_115626761	3.19249	FOX{C1,C2}.p2	NM_028014|2310067B10Rik|71947|RIKEN cDNA 2310067B10 gene	AK155233|2310067B10Rik|71947|RIKEN cDNA 2310067B10 gene
mm9_v1_chr1_+_173155184_173155238	3.1357	FOX{C1,C2}.p2	NM_013474|Apoa2|11807|apolipoprotein A-II	M79361|Apoa2|11807|apolipoprotein A-II	M79362|Apoa2|11807|apolipoprotein A-II	AK145823|Apoa2|11807|apolipoprotein A-II	X62772|Apoa2|11807|apolipoprotein A-II	BC031786|Apoa2|11807|apolipoprotein A-II
mm9_v1_chr5_+_53440591_53440620	3.02056	FOX{C1,C2}.p2	AK164786|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	NM_011402|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	AK004832|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	AK145599|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	AF081499|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2	BC096369|Slc34a2|20531|solute carrier family 34 (sodium phosphate), member 2
mm9_v1_chr2_+_35122282_35122330	2.94931	FOX{C1,C2}.p2	AK166831|Gsn|227753|gelsolin
mm9_v1_chr11_-_68770359_68770398	2.88092	FOX{C1,C2}.p2	BC089365|Arhgef15|442801|Rho guanine nucleotide exchange factor (GEF) 15	NM_177566|Arhgef15|442801|Rho guanine nucleotide exchange factor (GEF) 15
mm9_v1_chr3_-_121518046_121518134	2.84931	FOX{C1,C2}.p2	BC054446|Abcd3|19299|ATP-binding cassette, sub-family D (ALD), member 3	AK153298|Abcd3|19299|ATP-binding cassette, sub-family D (ALD), member 3	AK004660|Abcd3|19299|ATP-binding cassette, sub-family D (ALD), member 3	AK081952|Abcd3|19299|ATP-binding cassette, sub-family D (ALD), member 3	AK144060|Abcd3|19299|ATP-binding cassette, sub-family D (ALD), member 3	BC009119|Abcd3|19299|ATP-binding cassette, sub-family D (ALD), member 3	NM_008991|Abcd3|19299|ATP-binding cassette, sub-family D (ALD), member 3
mm9_v1_chr11_+_115626816_115626845	2.84189	FOX{C1,C2}.p2	BC053088|2310067B10Rik|71947|RIKEN cDNA 2310067B10 gene
mm9_v1_chr17_-_37712365_37712392	2.77617	FOX{C1,C2}.p2	NM_146289|Olfr113|258286|olfactory receptor 113	BC132178|Olfr113|258286|olfactory receptor 113	BC132180|Olfr113|258286|olfactory receptor 113
mm9_v1_chr14_-_32454060_32454136	2.67199	FOX{C1,C2}.p2	BC021360|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AK161488|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AK005505|Hacl1|56794|2-hydroxyacyl-CoA lyase 1
mm9_v1_chr15_-_6824238_6824366	2.66113	FOX{C1,C2}.p2	AK040020|Osmr|18414|oncostatin M receptor	AK087179|Osmr|18414|oncostatin M receptor	AF058805|Osmr|18414|oncostatin M receptor	NM_011019|Osmr|18414|oncostatin M receptor
mm9_v1_chr7_-_135073617_135073632	2.62822	FOX{C1,C2}.p2	AF378085|Prss8|76560|protease, serine, 8 (prostasin)	AY335911|Prss8|76560|protease, serine, 8 (prostasin)	NM_133351|Prss8|76560|protease, serine, 8 (prostasin)
mm9_v1_chr16_+_38362258_38362337	2.61672	FOX{C1,C2}.p2	NM_001081984|Popdc2|64082|popeye domain containing 2	BC064005|Popdc2|64082|popeye domain containing 2	NM_022318|Popdc2|64082|popeye domain containing 2	AK084713|Popdc2|64082|popeye domain containing 2	AF204175|Popdc2|64082|popeye domain containing 2
mm9_v1_chr3_+_124023954_124024027	2.5948	FOX{C1,C2}.p2	NM_146140|Tram1l1|229801|translocation associated membrane protein 1-like 1	AK052946|Tram1l1|229801|translocation associated membrane protein 1-like 1	AK048118|Tram1l1|229801|translocation associated membrane protein 1-like 1	AK083053|Tram1l1|229801|translocation associated membrane protein 1-like 1	AK044115|Tram1l1|229801|translocation associated membrane protein 1-like 1	BC024829|Tram1l1|229801|translocation associated membrane protein 1-like 1	BC027120|Tram1l1|229801|translocation associated membrane protein 1-like 1
mm9_v1_chr15_+_10107168_10107535	2.56911	FOX{C1,C2}.p2	AK054381|Prlr|19116|prolactin receptor	AK143335|Prlr|19116|prolactin receptor	AK050317|Prlr|19116|prolactin receptor	BC005555|Prlr|19116|prolactin receptor	BC006652|Prlr|19116|prolactin receptor	AK081676|Prlr|19116|prolactin receptor
mm9_v1_chr15_-_73640331_73640366	2.55395	FOX{C1,C2}.p2	BC087907|Ndufb4|68194|NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4
mm9_v1_chr8_-_47060486_47060605	2.54214	FOX{C1,C2}.p2	BC107256|1700029J07Rik|69479|RIKEN cDNA 1700029J07 gene	AK006501|1700029J07Rik|69479|RIKEN cDNA 1700029J07 gene	AK156041|1700029J07Rik|69479|RIKEN cDNA 1700029J07 gene	NM_001033148|1700029J07Rik|69479|RIKEN cDNA 1700029J07 gene
mm9_v1_chr19_+_6241665_6241742	2.53885	FOX{C1,C2}.p2	NM_194348|Atg2a|329015|ATG2 autophagy related 2 homolog A (S. cerevisiae)	BC063264|Atg2a|329015|ATG2 autophagy related 2 homolog A (S. cerevisiae)	AK129132|Atg2a|329015|ATG2 autophagy related 2 homolog A (S. cerevisiae)
mm9_v1_chr16_+_30065419_30065442	2.5236	FOX{C1,C2}.p2	AK133538|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	AK132536|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	BC018375|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	BC051428|Hes1|15205|hairy and enhancer of split 1 (Drosophila)	NM_008235|Hes1|15205|hairy and enhancer of split 1 (Drosophila)
mm9_v1_chr1_+_135142673_135142702	2.50868	FOX{C1,C2}.p2	NM_001160268|Plekha6|240753|pleckstrin homology domain containing, family A member 6	NM_182930|Plekha6|240753|pleckstrin homology domain containing, family A member 6	BC054547|Plekha6|240753|pleckstrin homology domain containing, family A member 6	AK173074|Plekha6|240753|pleckstrin homology domain containing, family A member 6
mm9_v1_chr2_+_30663433_30663516	2.4644	FOX{C1,C2}.p2	AK009056|Mettl11a|66617|methyltransferase like 11A	AK011888|Mettl11a|66617|methyltransferase like 11A	AK154783|Mettl11a|66617|methyltransferase like 11A	AK011960|Mettl11a|66617|methyltransferase like 11A	BC027220|Mettl11a|66617|methyltransferase like 11A	NM_170592|Mettl11a|66617|methyltransferase like 11A
mm9_v1_chr14_-_32454146_32454155	2.46136	FOX{C1,C2}.p2	AK041686|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AJ132139|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	AK050078|Hacl1|56794|2-hydroxyacyl-CoA lyase 1	NM_019975|Hacl1|56794|2-hydroxyacyl-CoA lyase 1
mm9_v1_chr2_-_60511707_60511810	2.45328	FOX{C1,C2}.p2	BC049185|Itgb6|16420|integrin beta 6	AK008867|Itgb6|16420|integrin beta 6	NM_021359|Itgb6|16420|integrin beta 6	AK019511|Itgb6|16420|integrin beta 6
mm9_v1_chr9_-_50560397_50560458	2.44137	FOX{C1,C2}.p2	BC064051|Hspb2|69253|heat shock protein 2	AK012780|Hspb2|69253|heat shock protein 2	NM_001164708|Hspb2|69253|heat shock protein 2	NM_024441|Hspb2|69253|heat shock protein 2
mm9_v1_chr9_-_119932620_119932715	2.42837	FOX{C1,C2}.p2	BC117959|Xirp1|22437|xin actin-binding repeat containing 1	BC117960|Xirp1|22437|xin actin-binding repeat containing 1	AF051945|Xirp1|22437|xin actin-binding repeat containing 1	NM_011724|Xirp1|22437|xin actin-binding repeat containing 1
mm9_v1_chr11_+_72974015_72974031	2.41516	FOX{C1,C2}.p2	AF333331|P2rx5|94045|purinergic receptor P2X, ligand-gated ion channel, 5	BC138189|P2rx5|94045|purinergic receptor P2X, ligand-gated ion channel, 5	BC145181|P2rx5|94045|purinergic receptor P2X, ligand-gated ion channel, 5	NM_033321|P2rx5|94045|purinergic receptor P2X, ligand-gated ion channel, 5
mm9_v1_chr11_-_11790403_11790410	2.40947	FOX{C1,C2}.p2	AK011834|Ddc|13195|dopa decarboxylase	AK149141|Ddc|13195|dopa decarboxylase	AK160769|Ddc|13195|dopa decarboxylase	NM_016672|Ddc|13195|dopa decarboxylase
mm9_v1_chr18_+_37844927_37845053	2.35763	FOX{C1,C2}.p2	BC049814|Pcdhga4|93712|protocadherin gamma subfamily A, 4	AY013798|Pcdhga4|93712|protocadherin gamma subfamily A, 4	NM_033587|Pcdhga4|93712|protocadherin gamma subfamily A, 4
mm9_v1_chr11_+_72974053_72974072	2.35231	FOX{C1,C2}.p2	AK134662|P2rx5|94045|purinergic receptor P2X, ligand-gated ion channel, 5
mm9_v1_chr5_-_34530284_34530386	2.33427	FOX{C1,C2}.p2	AK007824|Mxd4|17122|Max dimerization protein 4	AK131132|Mxd4|17122|Max dimerization protein 4	BC011303|Mxd4|17122|Max dimerization protein 4	NM_010753|Mxd4|17122|Max dimerization protein 4	AK134169|Mxd4|17122|Max dimerization protein 4
mm9_v1_chr1_+_12708582_12708625	2.32934	FOX{C1,C2}.p2	AK037389|Sulf1|240725|sulfatase 1	AY101178|Sulf1|240725|sulfatase 1	BC034547|Sulf1|240725|sulfatase 1	BC049276|Sulf1|240725|sulfatase 1	NM_172294|Sulf1|240725|sulfatase 1
mm9_v1_chr11_+_68939734_68939879	2.30962	FOX{C1,C2}.p2	NM_011786|Aloxe3|23801|arachidonate lipoxygenase 3	Y14695|Aloxe3|23801|arachidonate lipoxygenase 3	BC116258|Aloxe3|23801|arachidonate lipoxygenase 3	BC116259|Aloxe3|23801|arachidonate lipoxygenase 3
mm9_v1_chr14_+_119187092_119187139	2.28603	FOX{C1,C2}.p2	NM_001160096|Cldn10|58187|claudin 10	NM_001160097|Cldn10|58187|claudin 10	NM_001160098|Cldn10|58187|claudin 10	NM_023878|Cldn10|58187|claudin 10	AK020131|Cldn10|58187|claudin 10	BC021770|Cldn10|58187|claudin 10
mm9_v1_chr1_+_93076578_93076656	2.28537	FOX{C1,C2}.p2	AB019046|Ramp1|51801|receptor (calcitonin) activity modifying protein 1	AK157896|Ramp1|51801|receptor (calcitonin) activity modifying protein 1	AF146522|Ramp1|51801|receptor (calcitonin) activity modifying protein 1	AJ250489|Ramp1|51801|receptor (calcitonin) activity modifying protein 1	AK165238|Ramp1|51801|receptor (calcitonin) activity modifying protein 1	AF209904|Ramp1|51801|receptor (calcitonin) activity modifying protein 1	BC012644|Ramp1|51801|receptor (calcitonin) activity modifying protein 1
mm9_v1_chr9_-_107571304_107571323	2.24887	FOX{C1,C2}.p2	BC021324|Slc38a3|76257|solute carrier family 38, member 3
mm9_v1_chr19_-_24299471_24299519	2.23637	FOX{C1,C2}.p2	NM_011597|Tjp2|21873|tight junction protein 2
mm9_v1_chr18_+_37979199_37979219	2.23337	FOX{C1,C2}.p2	AF464163|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	NM_033583|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	AF464164|Pcdhgb4|93701|protocadherin gamma subfamily B, 4
mm9_v1_chr5_-_75098910_75098927	2.22892	FOX{C1,C2}.p2	AF034745|Lnx1|16924|ligand of numb-protein X 1	NM_001159577|Lnx1|16924|ligand of numb-protein X 1
mm9_v1_chr16_-_94591826_94592078	2.19212	FOX{C1,C2}.p2	AF216308|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	BC061117|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	NM_001159619|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	NM_001159620|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P	AF216307|Pigp|56176|phosphatidylinositol glycan anchor biosynthesis, class P
mm9_v1_chr17_+_12571455_12571482	2.17019	FOX{C1,C2}.p2	BC014773|Plg|18815|plasminogen	NM_008877|Plg|18815|plasminogen
mm9_v1_chr18_+_37911236_37911432	2.16045	FOX{C1,C2}.p2	BC066823|Pcdhgb7|93704|protocadherin gamma subfamily B, 7	AY013809|Pcdhgb7|93704|protocadherin gamma subfamily B, 7	NM_033579|Pcdhgb7|93704|protocadherin gamma subfamily B, 7
mm9_v1_chr8_+_23348971_23348971	2.15662	FOX{C1,C2}.p2	AB039946|Thsd1|56229|thrombospondin, type I, domain 1	BC119603|Thsd1|56229|thrombospondin, type I, domain 1	NM_019576|Thsd1|56229|thrombospondin, type I, domain 1
mm9_v1_chr12_+_31597051_31597056	2.13104	FOX{C1,C2}.p2	AK168483|Sh3yl1|24057|Sh3 domain YSC-like 1	D85926|Sh3yl1|24057|Sh3 domain YSC-like 1
mm9_v1_chr19_-_54018933_54018969	2.13061	FOX{C1,C2}.p2	BC040803|Bbip1|66360|BBSome interacting protein 1	AK011271|Bbip1|66360|BBSome interacting protein 1
mm9_v1_chr4_-_76240202_76240202	2.05697	FOX{C1,C2}.p2	BC086654|Ptprd|19266|protein tyrosine phosphatase, receptor type, D	NM_011211|Ptprd|19266|protein tyrosine phosphatase, receptor type, D
mm9_v1_chr8_-_25707414_25707480	2.0556	FOX{C1,C2}.p2	BC049931|Ido1|15930|indoleamine 2,3-dioxygenase 1	M69109|Ido1|15930|indoleamine 2,3-dioxygenase 1	NM_008324|Ido1|15930|indoleamine 2,3-dioxygenase 1
mm9_v1_chr10_+_62524324_62524364	2.05084	FOX{C1,C2}.p2	AK143947|Pbld1|68371|phenazine biosynthesis-like protein domain containing 1	AK002802|Pbld1|68371|phenazine biosynthesis-like protein domain containing 1	BC019997|Pbld1|68371|phenazine biosynthesis-like protein domain containing 1	NM_026701|Pbld1|68371|phenazine biosynthesis-like protein domain containing 1
mm9_v1_chr4_-_107596088_107596091	2.04307	FOX{C1,C2}.p2	AK169038|Cpt2|12896|carnitine palmitoyltransferase 2
mm9_v1_chr4_+_44769430_44769541	2.0208	FOX{C1,C2}.p2	NM_138590|Zcchc7|319885|zinc finger, CCHC domain containing 7	AK032353|Zcchc7|319885|zinc finger, CCHC domain containing 7	AK039158|Zcchc7|319885|zinc finger, CCHC domain containing 7	AK043238|Zcchc7|319885|zinc finger, CCHC domain containing 7	AK080785|Zcchc7|319885|zinc finger, CCHC domain containing 7	AK157728|Zcchc7|319885|zinc finger, CCHC domain containing 7	BC117020|Zcchc7|319885|zinc finger, CCHC domain containing 7	BC117022|Zcchc7|319885|zinc finger, CCHC domain containing 7	BC144774|Zcchc7|319885|zinc finger, CCHC domain containing 7
mm9_v1_chr9_+_21397165_21397375	2.01872	FOX{C1,C2}.p2	BC057071|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	NM_178619|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	AK030602|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene	AK028799|1810026J23Rik|69773|RIKEN cDNA 1810026J23 gene
mm9_v1_chr6_+_141472906_141473070	2.01102	FOX{C1,C2}.p2	AK045782|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	NM_001177772|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	NM_021471|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AK048926|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AK161010|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	BC078456|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AY007379|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1
mm9_v1_chr8_+_120225803_120225850	1.99863	FOX{C1,C2}.p2	Y09517|Hsd17b2|15486|hydroxysteroid (17-beta) dehydrogenase 2	AK004950|Hsd17b2|15486|hydroxysteroid (17-beta) dehydrogenase 2	NM_008290|Hsd17b2|15486|hydroxysteroid (17-beta) dehydrogenase 2
mm9_v1_chr11_+_34934956_34934982	1.98039	FOX{C1,C2}.p2	NM_011412|Slit3|20564|slit homolog 3 (Drosophila)	AK147292|Slit3|20564|slit homolog 3 (Drosophila)	BC150780|Slit3|20564|slit homolog 3 (Drosophila)
mm9_v1_chr16_-_84955488_84955582	1.96041	FOX{C1,C2}.p2	AK190067|App|11820|amyloid beta (A4) precursor protein	AK194558|App|11820|amyloid beta (A4) precursor protein	AK213784|App|11820|amyloid beta (A4) precursor protein
mm9_v1_chr9_-_121825422_121825428	1.95255	FOX{C1,C2}.p2	NM_010012|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1
mm9_v1_chr3_-_95085997_95085997	1.95218	FOX{C1,C2}.p2	BC057546|Prune|229589|prune homolog (Drosophila)	NM_173347|Prune|229589|prune homolog (Drosophila)
mm9_v1_chr1_+_90031368_90031409	1.93468	FOX{C1,C2}.p2	NM_145079|Ugt1a6a|94284|UDP glucuronosyltransferase 1 family, polypeptide A6A	U16818|Ugt1a6a|94284|UDP glucuronosyltransferase 1 family, polypeptide A6A	AK162514|Ugt1a6a|94284|UDP glucuronosyltransferase 1 family, polypeptide A6A	BC069940|Ugt1a6a|94284|UDP glucuronosyltransferase 1 family, polypeptide A6A	BC012716|Ugt1a6a|94284|UDP glucuronosyltransferase 1 family, polypeptide A6A
mm9_v1_chr15_+_100965071_100965110	1.8895	FOX{C1,C2}.p2	AK134712|Acvrl1|11482|activin A receptor, type II-like 1	AK170870|Acvrl1|11482|activin A receptor, type II-like 1	CT010330|Acvrl1|11482|activin A receptor, type II-like 1
mm9_v1_chr19_+_8738840_8738844	1.84127	FOX{C1,C2}.p2	AK081248|Chrm1|12669|cholinergic receptor, muscarinic 1, CNS
mm9_v1_chr11_-_119903061_119903095	1.82747	FOX{C1,C2}.p2	AF011908|Aatk|11302|apoptosis-associated tyrosine kinase	AK155100|Aatk|11302|apoptosis-associated tyrosine kinase	NM_001198787|Aatk|11302|apoptosis-associated tyrosine kinase	AK036705|Aatk|11302|apoptosis-associated tyrosine kinase
mm9_v1_chr17_-_90436488_90436574	1.82445	FOX{C1,C2}.p2	AJ006802|Nrxn1|18189|neurexin I
mm9_v1_chr2_+_67955769_67955862	1.81008	FOX{C1,C2}.p2	NM_020283|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	BC094660|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	BC132246|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	BC132528|B3galt1|26877|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm9_v1_chrX_-_92673432_92673467	1.80049	FOX{C1,C2}.p2	BC107257|Asb12|70392|ankyrin repeat and SOCS box-containing 12	AF403040|Asb12|70392|ankyrin repeat and SOCS box-containing 12	AK009644|Asb12|70392|ankyrin repeat and SOCS box-containing 12	NM_080858|Asb12|70392|ankyrin repeat and SOCS box-containing 12
mm9_v1_chr10_+_40657980_40658124	1.73254	FOX{C1,C2}.p2	AK080786|Wasf1|83767|WASP family 1
mm9_v1_chr2_+_10075242_10075276	1.72812	FOX{C1,C2}.p2	AK087428|Itih5|209378|inter-alpha (globulin) inhibitor H5	AK134707|Itih5|209378|inter-alpha (globulin) inhibitor H5	AK077381|Itih5|209378|inter-alpha (globulin) inhibitor H5
mm9_v1_chr9_-_121825407_121825416	1.7081	FOX{C1,C2}.p2	BC049969|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1	AF090317|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1	BC010973|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1	BC010974|Cyp8b1|13124|cytochrome P450, family 8, subfamily b, polypeptide 1
mm9_v1_chr10_+_127774845_127774868	1.6878	FOX{C1,C2}.p2	AK166814|Cs|12974|citrate synthase	AK012151|Cs|12974|citrate synthase	AK145643|Cs|12974|citrate synthase	AK167125|Cs|12974|citrate synthase	AK163273|Cs|12974|citrate synthase
mm9_v1_chr17_+_41071633_41071710	1.68248	FOX{C1,C2}.p2	NM_008650|Mut|17850|methylmalonyl-Coenzyme A mutase	BC019175|Mut|17850|methylmalonyl-Coenzyme A mutase	AK146309|Mut|17850|methylmalonyl-Coenzyme A mutase
mm9_v1_chr17_-_31266539_31266557	1.66819	FOX{C1,C2}.p2	BC011042|Tff3|21786|trefoil factor 3, intestinal	AK008538|Tff3|21786|trefoil factor 3, intestinal	D38410|Tff3|21786|trefoil factor 3, intestinal	NM_011575|Tff3|21786|trefoil factor 3, intestinal
mm9_v1_chr16_-_38800293_38800318	1.62809	FOX{C1,C2}.p2	BC046604|Upk1b|22268|uroplakin 1B	AK083101|Upk1b|22268|uroplakin 1B	AK086926|Upk1b|22268|uroplakin 1B	AK053004|Upk1b|22268|uroplakin 1B	NM_178924|Upk1b|22268|uroplakin 1B
mm9_v1_chr12_+_29360082_29360188	1.6215	FOX{C1,C2}.p2	AK089966|Adi1|104923|acireductone dioxygenase 1	AK145831|Adi1|104923|acireductone dioxygenase 1
mm9_v1_chrX_+_97969784_97969833	1.6075	FOX{C1,C2}.p2	NM_001177779|Dlg3|53310|discs, large homolog 3 (Drosophila)
mm9_v1_chr2_+_58607580_58607600	1.59525	FOX{C1,C2}.p2	AY152393|Upp2|76654|uridine phosphorylase 2	NM_029692|Upp2|76654|uridine phosphorylase 2	AK149444|Upp2|76654|uridine phosphorylase 2
mm9_v1_chr15_-_102993714_102993747	1.59389	FOX{C1,C2}.p2	BC062960|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	NM_027885|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK090367|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK198888|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK204061|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase
mm9_v1_chr4_-_15076093_15076277	1.55129	FOX{C1,C2}.p2	AK039240|Necab1|69352|N-terminal EF-hand calcium binding protein 1	AK081951|Necab1|69352|N-terminal EF-hand calcium binding protein 1	AY278200|Necab1|69352|N-terminal EF-hand calcium binding protein 1	BC067055|Necab1|69352|N-terminal EF-hand calcium binding protein 1	NM_178617|Necab1|69352|N-terminal EF-hand calcium binding protein 1
mm9_v1_chr2_-_91469372_91469446	1.54424	FOX{C1,C2}.p2	M81394|F2|14061|coagulation factor II
mm9_v1_chr2_+_163332550_163332692	1.52684	FOX{C1,C2}.p2	AF015275|Hnf4a|15378|hepatic nuclear factor 4, alpha	FJ608819|Hnf4a|15378|hepatic nuclear factor 4, alpha	FJ608820|Hnf4a|15378|hepatic nuclear factor 4, alpha	FJ608821|Hnf4a|15378|hepatic nuclear factor 4, alpha	EF193391|Hnf4a|15378|hepatic nuclear factor 4, alpha
mm9_v1_chr18_+_57628139_57628180	1.51384	FOX{C1,C2}.p2	NM_001134697|Ctxn3|629147|cortexin 3	AK042789|Ctxn3|629147|cortexin 3
mm9_v1_chr10_+_87323855_87324094	1.50833	FOX{C1,C2}.p2	NM_001111274|Igf1|16000|insulin-like growth factor 1	NM_001111276|Igf1|16000|insulin-like growth factor 1	NM_184052|Igf1|16000|insulin-like growth factor 1	X04480|Igf1|16000|insulin-like growth factor 1	X04482|Igf1|16000|insulin-like growth factor 1
mm9_v1_chr6_-_127076410_127076426	1.49527	FOX{C1,C2}.p2	AK011225|Ccnd2|12444|cyclin D2
mm9_v1_chr6_+_141612118_141612134	1.48795	FOX{C1,C2}.p2	AF250912|Slco1b2|28253|solute carrier organic anion transporter family, member 1b2
mm9_v1_chr2_-_73150559_73150757	1.47603	FOX{C1,C2}.p2	AK006260|Cir1|66935|corepressor interacting with RBPJ, 1	BC061077|Cir1|66935|corepressor interacting with RBPJ, 1	BC094283|Cir1|66935|corepressor interacting with RBPJ, 1	BC089602|Cir1|66935|corepressor interacting with RBPJ, 1	AK008242|Cir1|66935|corepressor interacting with RBPJ, 1	BC099444|Cir1|66935|corepressor interacting with RBPJ, 1	AK131674|Cir1|66935|corepressor interacting with RBPJ, 1	NM_025854|Cir1|66935|corepressor interacting with RBPJ, 1	BC012219|Cir1|66935|corepressor interacting with RBPJ, 1
mm9_v1_chr19_-_54019116_54019140	1.44291	FOX{C1,C2}.p2	AK010048|Bbip1|66360|BBSome interacting protein 1	NM_001195338|Bbip1|66360|BBSome interacting protein 1	NM_001195348|Bbip1|66360|BBSome interacting protein 1
mm9_v1_chr4_-_41464365_41464365	1.44198	FOX{C1,C2}.p2	AB231294|1110017D15Rik|73721|RIKEN cDNA 1110017D15 gene	NM_001048005|1110017D15Rik|73721|RIKEN cDNA 1110017D15 gene
mm9_v1_chr4_+_55093796_55093934	1.38202	FOX{C1,C2}.p2	AK035041|Zfp462|242466|zinc finger protein 462
mm9_v1_chr16_+_91270319_91270415	1.36633	FOX{C1,C2}.p2	AK158791|Olig1|50914|oligodendrocyte transcription factor 1
mm9_v1_chr10_+_69903653_69903701	1.34769	FOX{C1,C2}.p2	AK041147|Fam13c|71721|family with sequence similarity 13, member C	NM_001143776|Fam13c|71721|family with sequence similarity 13, member C	NM_024244|Fam13c|71721|family with sequence similarity 13, member C	AK082202|Fam13c|71721|family with sequence similarity 13, member C	AK004797|Fam13c|71721|family with sequence similarity 13, member C	BC129839|Fam13c|71721|family with sequence similarity 13, member C	BC129840|Fam13c|71721|family with sequence similarity 13, member C
mm9_v1_chr8_+_107607652_107607676	1.34014	FOX{C1,C2}.p2	NM_001159415|Ces3b|13909|carboxylesterase 3B	NM_144511|Ces3b|13909|carboxylesterase 3B	BC019147|Ces3b|13909|carboxylesterase 3B	BC010812|Ces3b|13909|carboxylesterase 3B	BC019926|Ces3b|13909|carboxylesterase 3B
mm9_v1_chr11_+_66725482_66725594	1.30646	FOX{C1,C2}.p2	AK051285|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	AK041182|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	AK051645|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	NM_178656|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	AK084056|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	AK051158|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	BC147296|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels	BC147297|Pirt|193003|phosphoinositide-interacting regulator of transient receptor potential channels
mm9_v1_chr1_+_136079079_136079104	1.28595	FOX{C1,C2}.p2	CT010283|Chi3l1|12654|chitinase 3-like 1	EU313768|Chi3l1|12654|chitinase 3-like 1
mm9_v1_chr14_+_14286471_14286627	1.27628	FOX{C1,C2}.p2	NM_001163032|Synpr|72003|synaptoporin	AK033999|Synpr|72003|synaptoporin	AK032442|Synpr|72003|synaptoporin	AK045705|Synpr|72003|synaptoporin	AK049661|Synpr|72003|synaptoporin
mm9_v1_chr6_-_113841356_113841375	1.24893	FOX{C1,C2}.p2	DQ406822|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	AK051287|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	BC075643|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2	NM_001036684|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2
mm9_v1_chr4_+_40090446_40090557	1.24485	FOX{C1,C2}.p2	AK034998|Aco1|11428|aconitase 1	AK163985|Aco1|11428|aconitase 1	AK027914|Aco1|11428|aconitase 1	AK129025|Aco1|11428|aconitase 1	BC005454|Aco1|11428|aconitase 1	X61147|Aco1|11428|aconitase 1	AK085951|Aco1|11428|aconitase 1
mm9_v1_chr9_-_86775154_86775279	1.24275	FOX{C1,C2}.p2	M83985|Snap91|20616|synaptosomal-associated protein 91	NM_013669|Snap91|20616|synaptosomal-associated protein 91	BC031773|Snap91|20616|synaptosomal-associated protein 91	AK159570|Snap91|20616|synaptosomal-associated protein 91	AK147087|Snap91|20616|synaptosomal-associated protein 91
mm9_v1_chr17_+_30272123_30272409	1.23103	FOX{C1,C2}.p2	BC027161|Zfand3|21769|zinc finger, AN1-type domain 3	EF437371|Zfand3|21769|zinc finger, AN1-type domain 3	BC024483|Zfand3|21769|zinc finger, AN1-type domain 3
mm9_v1_chr10_-_88996314_88996370	1.21832	FOX{C1,C2}.p2	U09417|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	NM_001163504|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4
mm9_v1_chr11_+_76718046_76718079	1.21173	FOX{C1,C2}.p2	AK009118|Tmigd1|66601|transmembrane and immunoglobulin domain containing 1	NM_025655|Tmigd1|66601|transmembrane and immunoglobulin domain containing 1	BC061082|Tmigd1|66601|transmembrane and immunoglobulin domain containing 1	BC022683|Tmigd1|66601|transmembrane and immunoglobulin domain containing 1
mm9_v1_chr12_+_4082739_4082786	1.20312	FOX{C1,C2}.p2	AY035893|Dnajc27|217378|DnaJ (Hsp40) homolog, subfamily C, member 27
mm9_v1_chr17_+_12571494_12571524	1.19959	FOX{C1,C2}.p2	BC057186|Plg|18815|plasminogen	AK132254|Plg|18815|plasminogen	J04766|Plg|18815|plasminogen	AK040840|Plg|18815|plasminogen
mm9_v1_chr17_-_35286889_35287021	1.19451	FOX{C1,C2}.p2	AK204617|Prrc2a|53761|proline-rich coiled-coil 2A
mm9_v1_chr17_-_90487479_90487653	1.18908	FOX{C1,C2}.p2	AK032032|Nrxn1|18189|neurexin I
mm9_v1_chr11_+_100943978_100943999	1.18753	FOX{C1,C2}.p2	AF521095|Coasy|71743|Coenzyme A synthase	BC064753|Coasy|71743|Coenzyme A synthase
mm9_v1_chr7_+_120350963_120350978	1.16534	FOX{C1,C2}.p2	AK146628|Arntl|11865|aryl hydrocarbon receptor nuclear translocator-like	AK147145|Arntl|11865|aryl hydrocarbon receptor nuclear translocator-like	NM_007489|Arntl|11865|aryl hydrocarbon receptor nuclear translocator-like
mm9_v1_chr16_+_22918406_22918454	1.15135	FOX{C1,C2}.p2	AK009310|Fetub|59083|fetuin beta	AK009554|Fetub|59083|fetuin beta	AK037043|Fetub|59083|fetuin beta	NM_001083905|Fetub|59083|fetuin beta
mm9_v1_chr5_-_35448316_35448420	1.13335	FOX{C1,C2}.p2	BC057979|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	BC032170|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	BC046641|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	D00622|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	BC094324|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	NM_013587|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK171471|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK089250|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK166616|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK168421|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AJ639614|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK169132|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK150451|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK152485|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK153323|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK166746|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK166819|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	S67967|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1	AK145710|Lrpap1|16976|low density lipoprotein receptor-related protein associated protein 1
mm9_v1_chr3_-_113159420_113159575	1.11034	FOX{C1,C2}.p2	BC100579|Amy2a5|109959|amylase 2a5	BC094924|Amy2a5|109959|amylase 2a5	AK078968|Amy2a5|109959|amylase 2a5	X02576|Amy2a5|109959|amylase 2a5	V00718|Amy2a5|109959|amylase 2a5	X02577|Amy2a5|109959|amylase 2a5	X02578|Amy2a5|109959|amylase 2a5	X02579|Amy2a5|109959|amylase 2a5	AK133526|Amy2a5|109959|amylase 2a5	NM_001042711|Amy2a5|109959|amylase 2a5	NM_001160150|Amy2a4|100043684|amylase 2a4	NM_001160151|Amy2a3|100043686|amylase 2a3	NM_001160152|Amy2a2|100043688|amylase 2a2
mm9_v1_chr12_+_85455277_85455306	1.10696	FOX{C1,C2}.p2	NM_028821|Dnalc1|105000|dynein, axonemal, light chain 1
mm9_v1_chr8_-_86097128_86097151	1.10163	FOX{C1,C2}.p2	AK172506|Tecr|106529|trans-2,3-enoyl-CoA reductase	AK171718|Tecr|106529|trans-2,3-enoyl-CoA reductase
mm9_v1_chrX_+_136335346_136335366	1.0839	FOX{C1,C2}.p2	NM_016675|Cldn2|12738|claudin 2	BC085494|Cldn2|12738|claudin 2
mm9_v1_chr2_+_120289460_120289608	1.07301	FOX{C1,C2}.p2	AF127766|Capn3|12335|calpain 3	BC107011|Capn3|12335|calpain 3	BC139790|Capn3|12335|calpain 3	X92523|Capn3|12335|calpain 3
mm9_v1_chr18_+_37874471_37874595	1.07225	FOX{C1,C2}.p2	AK034910|Pcdhga7|93715|protocadherin gamma subfamily A, 7	BC077712|Pcdhga7|93715|protocadherin gamma subfamily A, 7	NM_033590|Pcdhga7|93715|protocadherin gamma subfamily A, 7	AY013801|Pcdhga7|93715|protocadherin gamma subfamily A, 7
mm9_v1_chr2_-_13413502_13413502	1.06664	FOX{C1,C2}.p2	NM_001081084|Cubn|65969|cubilin (intrinsic factor-cobalamin receptor)
mm9_v1_chr18_-_65553541_65553541	1.06563	FOX{C1,C2}.p2	NM_001037294|Alpk2|225638|alpha-kinase 2
mm9_v1_chr13_-_113971103_113971104	1.03951	FOX{C1,C2}.p2	BC117981|Gzmk|14945|granzyme K	NM_008196|Gzmk|14945|granzyme K
mm9_v1_chr16_+_62854129_62854197	1.03385	FOX{C1,C2}.p2	AK163032|Pros1|19128|protein S (alpha)	AK145501|Pros1|19128|protein S (alpha)	NM_011173|Pros1|19128|protein S (alpha)	Z25469|Pros1|19128|protein S (alpha)	BC128316|Pros1|19128|protein S (alpha)
mm9_v1_chr9_-_45012097_45012172	1.01773	FOX{C1,C2}.p2	BC021368|Tmprss4|214523|transmembrane protease, serine 4	AY043240|Tmprss4|214523|transmembrane protease, serine 4	NM_145403|Tmprss4|214523|transmembrane protease, serine 4	AK078890|Tmprss4|214523|transmembrane protease, serine 4
mm9_v1_chr6_+_113442698_113442948	1.01438	FOX{C1,C2}.p2	
mm9_v1_chr9_+_44048756_44048763	1.01308	FOX{C1,C2}.p2	NM_001081369|Ccdc153|270150|coiled-coil domain containing 153
mm9_v1_chr19_-_39887217_39887303	1.00438	FOX{C1,C2}.p2	AF047727|Cyp2c40|13099|cytochrome P450, family 2, subfamily c, polypeptide 40	BC139471|Cyp2c40|13099|cytochrome P450, family 2, subfamily c, polypeptide 40	BC139472|Cyp2c40|13099|cytochrome P450, family 2, subfamily c, polypeptide 40	NM_010004|Cyp2c40|13099|cytochrome P450, family 2, subfamily c, polypeptide 40
mm9_v1_chr6_-_127075853_127076093	0.99765	FOX{C1,C2}.p2	AK193960|Ccnd2|12444|cyclin D2	AK011429|Ccnd2|12444|cyclin D2	AK009602|Ccnd2|12444|cyclin D2
mm9_v1_chr11_-_118770859_118770872	0.996781	FOX{C1,C2}.p2	AK049926|Rbfox3|52897|RNA binding protein, fox-1 homolog (C. elegans) 3	AK160816|Rbfox3|52897|RNA binding protein, fox-1 homolog (C. elegans) 3	AK086669|Rbfox3|52897|RNA binding protein, fox-1 homolog (C. elegans) 3
mm9_v1_chr12_-_105228099_105228168	0.991093	FOX{C1,C2}.p2	BC096585|Serpina11|380780|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11	BC024087|Serpina11|380780|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11	AK149420|Serpina11|380780|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11	NM_199314|Serpina11|380780|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11	BC096459|Serpina11|380780|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11	NM_001166350|Serpina11|380780|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11
mm9_v1_chr19_-_60937266_60937332	0.989102	FOX{C1,C2}.p2	AF325263|Sfxn4|94281|sideroflexin 4	BC089535|Sfxn4|94281|sideroflexin 4	AK148530|Sfxn4|94281|sideroflexin 4	BC058211|Sfxn4|94281|sideroflexin 4	NM_053198|Sfxn4|94281|sideroflexin 4
mm9_v1_chrX_+_57252655_57252676	0.964608	FOX{C1,C2}.p2	M23109|F9|14071|coagulation factor IX
mm9_v1_chr18_+_37979242_37979328	0.963161	FOX{C1,C2}.p2	BC138677|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	AF464160|Pcdhgc5|93708|protocadherin gamma subfamily C, 5	AY013813|Pcdhgc5|93708|protocadherin gamma subfamily C, 5
mm9_v1_chrX_+_57252630_57252647	0.95745	FOX{C1,C2}.p2	AK149372|F9|14071|coagulation factor IX	NM_007979|F9|14071|coagulation factor IX	BC125617|F9|14071|coagulation factor IX	BC132393|F9|14071|coagulation factor IX
mm9_v1_chr10_+_127774872_127774973	0.955621	FOX{C1,C2}.p2	BC013554|Cs|12974|citrate synthase	BC029754|Cs|12974|citrate synthase	NM_026444|Cs|12974|citrate synthase	AB056479|Cs|12974|citrate synthase
mm9_v1_chr17_-_25969789_25969866	0.954853	FOX{C1,C2}.p2	BC020110|Stub1|56424|STIP1 homology and U-Box containing protein 1	AF129086|Stub1|56424|STIP1 homology and U-Box containing protein 1	AK004464|Stub1|56424|STIP1 homology and U-Box containing protein 1	AK045776|Stub1|56424|STIP1 homology and U-Box containing protein 1	AK002752|Stub1|56424|STIP1 homology and U-Box containing protein 1
mm9_v1_chr14_+_56291071_56291136	0.9504	FOX{C1,C2}.p2	NM_177992|Gmpr2|105446|guanosine monophosphate reductase 2	AK031004|Gmpr2|105446|guanosine monophosphate reductase 2	AK163048|Gmpr2|105446|guanosine monophosphate reductase 2	AK075772|Gmpr2|105446|guanosine monophosphate reductase 2	BC024109|Gmpr2|105446|guanosine monophosphate reductase 2	BC003886|Gmpr2|105446|guanosine monophosphate reductase 2
mm9_v1_chr19_-_39961258_39961288	0.948296	FOX{C1,C2}.p2	NM_001104525|Cyp2c69|100043108|cytochrome P450, family 2, subfamily c, polypeptide 69	BC145630|Cyp2c69|100043108|cytochrome P450, family 2, subfamily c, polypeptide 69
mm9_v1_chr11_+_100943878_100943967	0.935262	FOX{C1,C2}.p2	AK004878|Coasy|71743|Coenzyme A synthase	AK170330|Coasy|71743|Coenzyme A synthase	AK159405|Coasy|71743|Coenzyme A synthase	AK159912|Coasy|71743|Coenzyme A synthase	NM_027896|Coasy|71743|Coenzyme A synthase	AK166894|Coasy|71743|Coenzyme A synthase
mm9_v1_chr4_+_8534378_8534506	0.913122	FOX{C1,C2}.p2	AK216326|Rab2a|59021|RAB2A, member RAS oncogene family
mm9_v1_chr6_+_113421513_113421567	0.902676	FOX{C1,C2}.p2	AF458066|Il17rc|171095|interleukin 17 receptor C
mm9_v1_chr10_+_128390564_128390580	0.888368	FOX{C1,C2}.p2	L16544|Itga7|16404|integrin alpha 7
mm9_v1_chrX_+_139997806_139997811	0.886972	FOX{C1,C2}.p2	NM_008778|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3	BC053403|Pak3|18481|p21 protein (Cdc42/Rac)-activated kinase 3
mm9_v1_chr2_+_164439199_164439221	0.878841	FOX{C1,C2}.p2	AY541526|Wfdc6b|433502|WAP four-disulfide core domain 6B	NM_001012725|Wfdc6b|433502|WAP four-disulfide core domain 6B	BC141216|Wfdc6b|433502|WAP four-disulfide core domain 6B
mm9_v1_chr5_+_120284671_120284671	0.869206	FOX{C1,C2}.p2	BC090639|Tbx5|21388|T-box 5	NM_011537|Tbx5|21388|T-box 5
mm9_v1_chr11_-_118770873_118770885	0.866731	FOX{C1,C2}.p2	AK079086|Rbfox3|52897|RNA binding protein, fox-1 homolog (C. elegans) 3	NM_001024931|Rbfox3|52897|RNA binding protein, fox-1 homolog (C. elegans) 3	NM_001039167|Rbfox3|52897|RNA binding protein, fox-1 homolog (C. elegans) 3	NM_001039168|Rbfox3|52897|RNA binding protein, fox-1 homolog (C. elegans) 3
mm9_v1_chr14_-_56143027_56143052	0.854814	FOX{C1,C2}.p2	L14935|Nrl|18185|neural retina leucine zipper gene	NM_008736|Nrl|18185|neural retina leucine zipper gene	AK044275|Nrl|18185|neural retina leucine zipper gene
mm9_v1_chr10_+_127774778_127774839	0.851265	FOX{C1,C2}.p2	AK149990|Cs|12974|citrate synthase	AK010298|Cs|12974|citrate synthase
mm9_v1_chr7_+_53693190_53693196	0.839218	FOX{C1,C2}.p2	AK079373|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1
mm9_v1_chr7_+_31497227_31497370	0.81273	FOX{C1,C2}.p2	AK143905|Atp4a|11944|ATPase, H+/K+ exchanging, gastric, alpha polypeptide	BC015262|Atp4a|11944|ATPase, H+/K+ exchanging, gastric, alpha polypeptide	NM_018731|Atp4a|11944|ATPase, H+/K+ exchanging, gastric, alpha polypeptide	U17282|Atp4a|11944|ATPase, H+/K+ exchanging, gastric, alpha polypeptide
mm9_v1_chr9_+_15043658_15043696	0.808414	FOX{C1,C2}.p2	AK161045|2200002K05Rik|69137|RIKEN cDNA 2200002K05 gene
mm9_v1_chr1_-_170362244_170362272	0.807101	FOX{C1,C2}.p2	BC054376|Pbx1|18514|pre B-cell leukemia transcription factor 1	AK037006|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr13_+_49600158_49600323	0.800729	FOX{C1,C2}.p2	AK040995|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	BC089559|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	NM_001012324|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	AK134746|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	AK163501|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	BC056468|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	BC065151|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific	AK038812|Ecm2|407800|extracellular matrix protein 2, female organ and adipocyte specific
mm9_v1_chr6_-_113841295_113841343	0.79815	FOX{C1,C2}.p2	AK147357|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2
mm9_v1_chr17_-_45823086_45823135	0.792099	FOX{C1,C2}.p2	AK090200|Tmem63b|224807|transmembrane protein 63b
mm9_v1_chr3_+_32468408_32468474	0.782909	FOX{C1,C2}.p2	BC002133|Mfn1|67414|mitofusin 1	AK009490|Mfn1|67414|mitofusin 1
mm9_v1_chr16_+_41532938_41533160	0.77304	FOX{C1,C2}.p2	BC059067|Lsamp|268890|limbic system-associated membrane protein	AK158702|Lsamp|268890|limbic system-associated membrane protein	AK030681|Lsamp|268890|limbic system-associated membrane protein
mm9_v1_chr6_+_120723785_120723785	0.7667	FOX{C1,C2}.p2	BC116828|Slc25a18|71803|solute carrier family 25 (mitochondrial carrier), member 18	BC137603|Slc25a18|71803|solute carrier family 25 (mitochondrial carrier), member 18	NM_001081048|Slc25a18|71803|solute carrier family 25 (mitochondrial carrier), member 18
mm9_v1_chr1_+_89999782_89999852	0.758964	FOX{C1,C2}.p2	NM_201410|Ugt1a6b|394435|UDP glucuronosyltransferase 1 family, polypeptide A6B	BC026561|Ugt1a6b|394435|UDP glucuronosyltransferase 1 family, polypeptide A6B
mm9_v1_chr12_+_85455319_85455327	0.740213	FOX{C1,C2}.p2	AK005826|Dnalc1|105000|dynein, axonemal, light chain 1	BC070454|Dnalc1|105000|dynein, axonemal, light chain 1
mm9_v1_chr17_+_3397206_3397287	0.736138	FOX{C1,C2}.p2	AB022915|Tiam2|24001|T-cell lymphoma invasion and metastasis 2	NM_011878|Tiam2|24001|T-cell lymphoma invasion and metastasis 2	AK158137|Tiam2|24001|T-cell lymphoma invasion and metastasis 2	AK129474|Tiam2|24001|T-cell lymphoma invasion and metastasis 2
mm9_v1_chr17_-_27760308_27760448	0.73504	FOX{C1,C2}.p2	AF264064|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3	NM_019837|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3	BC046805|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3	BC016534|Nudt3|56409|nudix (nucleotide diphosphate linked moiety X)-type motif 3
mm9_v1_chr1_-_174825067_174825072	0.723835	FOX{C1,C2}.p2	AK144248|Apcs|20219|serum amyloid P-component	AK165699|Apcs|20219|serum amyloid P-component
mm9_v1_chr7_+_28438881_28439052	0.710002	FOX{C1,C2}.p2	AK013779|Ttc9b|73032|tetratricopeptide repeat domain 9B	BC089566|Ttc9b|73032|tetratricopeptide repeat domain 9B	NM_028417|Ttc9b|73032|tetratricopeptide repeat domain 9B	BC048750|Ttc9b|73032|tetratricopeptide repeat domain 9B
mm9_v1_chr17_-_45823145_45823192	0.703118	FOX{C1,C2}.p2	NM_198167|Tmem63b|224807|transmembrane protein 63b	AK159673|Tmem63b|224807|transmembrane protein 63b
mm9_v1_chr14_+_66963139_66963219	0.699881	FOX{C1,C2}.p2	BC014707|Stmn4|56471|stathmin-like 4	BC046752|Stmn4|56471|stathmin-like 4	NM_019675|Stmn4|56471|stathmin-like 4
mm9_v1_chr5_+_125048757_125048805	0.696122	FOX{C1,C2}.p2	AK031829|Tctn2|67978|tectonic family member 2	NM_026486|Tctn2|67978|tectonic family member 2	DQ278869|Tctn2|67978|tectonic family member 2	AK012720|Tctn2|67978|tectonic family member 2	AK014476|Tctn2|67978|tectonic family member 2	AK165102|Tctn2|67978|tectonic family member 2	AK083080|Tctn2|67978|tectonic family member 2	AK032378|Tctn2|67978|tectonic family member 2	AK087856|Tctn2|67978|tectonic family member 2	BC058375|Tctn2|67978|tectonic family member 2
mm9_v1_chr14_+_56097682_56097776	0.693799	FOX{C1,C2}.p2	AB045132|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4	AK018788|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4	AK146988|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4	BC003484|Dhrs4|28200|dehydrogenase/reductase (SDR family) member 4
mm9_v1_chrX_-_99447501_99447506	0.690637	FOX{C1,C2}.p2	AK148042|Cited1|12705|Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1	U65091|Cited1|12705|Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
mm9_v1_chr17_+_75864877_75864952	0.68255	FOX{C1,C2}.p2	NM_207246|Rasgrp3|240168|RAS, guanyl releasing protein 3	BC066127|Rasgrp3|240168|RAS, guanyl releasing protein 3
mm9_v1_chr9_+_88734001_88734001	0.667384	FOX{C1,C2}.p2	NM_001177858|Trim43c|666731|tripartite motif-containing 43C
mm9_v1_chr3_-_14808320_14808364	0.65891	FOX{C1,C2}.p2	BC132432|Car1|12346|carbonic anhydrase 1	BC132434|Car1|12346|carbonic anhydrase 1	M32452|Car1|12346|carbonic anhydrase 1	AK172076|Car1|12346|carbonic anhydrase 1	AK003066|Car1|12346|carbonic anhydrase 1	AK146372|Car1|12346|carbonic anhydrase 1	AK167969|Car1|12346|carbonic anhydrase 1	NM_009799|Car1|12346|carbonic anhydrase 1
mm9_v1_chr19_-_36194284_36194373	0.636309	FOX{C1,C2}.p2	AF041847|Ankrd1|107765|ankyrin repeat domain 1 (cardiac muscle)	BC037138|Ankrd1|107765|ankyrin repeat domain 1 (cardiac muscle)	AK009655|Ankrd1|107765|ankyrin repeat domain 1 (cardiac muscle)	AK146471|Ankrd1|107765|ankyrin repeat domain 1 (cardiac muscle)	AK146940|Ankrd1|107765|ankyrin repeat domain 1 (cardiac muscle)	AK009959|Ankrd1|107765|ankyrin repeat domain 1 (cardiac muscle)	AK146627|Ankrd1|107765|ankyrin repeat domain 1 (cardiac muscle)	NM_013468|Ankrd1|107765|ankyrin repeat domain 1 (cardiac muscle)	AK145944|Ankrd1|107765|ankyrin repeat domain 1 (cardiac muscle)
mm9_v1_chr7_+_36182085_36182138	0.613923	FOX{C1,C2}.p2	AK012067|Ccdc123|72140|coiled-coil domain containing 123	NM_028120|Ccdc123|72140|coiled-coil domain containing 123	AK082303|Ccdc123|72140|coiled-coil domain containing 123
mm9_v1_chr11_-_96680500_96680758	0.613666	FOX{C1,C2}.p2	AK201733|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	BC022152|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chr17_+_24873561_24873602	0.608861	FOX{C1,C2}.p2	BC090646|Sepx1|27361|selenoprotein X 1	NM_013759|Sepx1|27361|selenoprotein X 1
mm9_v1_chr13_-_99407290_99407364	0.602838	FOX{C1,C2}.p2	AK002365|Tmem174|68344|transmembrane protein 174	AK057630|Tmem174|68344|transmembrane protein 174	NM_026685|Tmem174|68344|transmembrane protein 174
mm9_v1_chr15_-_76554192_76554281	0.600635	FOX{C1,C2}.p2	AK046662|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	BC026997|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	BC019462|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK053546|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK163615|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK021050|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK165937|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK075645|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK085641|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK140368|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	AK140578|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	NM_145472|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene	NM_176828|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene
mm9_v1_chr6_-_49214015_49214054	0.599669	FOX{C1,C2}.p2	AK170599|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK076230|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK089980|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK171708|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK005187|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	NM_198102|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK148552|Tra2a|101214|transformer 2 alpha homolog (Drosophila)
mm9_v1_chr10_+_5057034_5057137	0.569978	FOX{C1,C2}.p2	
mm9_v1_chrX_-_35254867_35254946	0.569276	FOX{C1,C2}.p2	BC099963|Rhox9|104384|reproductive homeobox 9	BC099451|Rhox9|104384|reproductive homeobox 9	AF201698|Rhox9|104384|reproductive homeobox 9	DQ058646|Rhox9|104384|reproductive homeobox 9	NM_023894|Rhox9|104384|reproductive homeobox 9
mm9_v1_chr2_+_118993521_118993566	0.564441	FOX{C1,C2}.p2	AK028116|Gchfr|320415|GTP cyclohydrolase I feedback regulator	AK028122|Gchfr|320415|GTP cyclohydrolase I feedback regulator	NM_177157|Gchfr|320415|GTP cyclohydrolase I feedback regulator	BC132450|Gchfr|320415|GTP cyclohydrolase I feedback regulator	BC132478|Gchfr|320415|GTP cyclohydrolase I feedback regulator	BC096406|Gchfr|320415|GTP cyclohydrolase I feedback regulator
mm9_v1_chr12_-_105282485_105282654	0.56004	FOX{C1,C2}.p2	AY326419|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	AK014346|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	BC062143|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	AK014589|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	NM_026535|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12
mm9_v1_chr18_-_31476527_31476591	0.552919	FOX{C1,C2}.p2	AK046484|Rit2|19762|Ras-like without CAAX 2	AK138206|Rit2|19762|Ras-like without CAAX 2
mm9_v1_chr7_-_148661047_148661061	0.551957	FOX{C1,C2}.p2	NM_025593|Polr2l|66491|polymerase (RNA) II (DNA directed) polypeptide L
mm9_v1_chr3_+_102824458_102824505	0.550628	FOX{C1,C2}.p2	NM_001161854|Csde1|229663|cold shock domain containing E1, RNA binding	NM_144901|Csde1|229663|cold shock domain containing E1, RNA binding
mm9_v1_chr4_-_133810011_133810020	0.550603	FOX{C1,C2}.p2	AK012898|Grrp1|72690|glycine/arginine rich protein 1	BC048704|Grrp1|72690|glycine/arginine rich protein 1	NM_001099296|Grrp1|72690|glycine/arginine rich protein 1
mm9_v1_chr9_-_44817429_44817729	0.545662	FOX{C1,C2}.p2	EF474454|Cd3e|12501|CD3 antigen, epsilon polypeptide	GU456631|Cd3e|12501|CD3 antigen, epsilon polypeptide	BC098236|Cd3e|12501|CD3 antigen, epsilon polypeptide	BC028636|Cd3e|12501|CD3 antigen, epsilon polypeptide	BC145926|Cd3e|12501|CD3 antigen, epsilon polypeptide	BC145954|Cd3e|12501|CD3 antigen, epsilon polypeptide	J02990|Cd3e|12501|CD3 antigen, epsilon polypeptide	NM_007648|Cd3e|12501|CD3 antigen, epsilon polypeptide	AK041607|Cd3e|12501|CD3 antigen, epsilon polypeptide
mm9_v1_chr18_+_37133455_37133703	0.534724	FOX{C1,C2}.p2	BC080863|Pcdha7|12939|protocadherin alpha 7	AY013765|Pcdha7|12939|protocadherin alpha 7	NM_009957|Pcdha7|12939|protocadherin alpha 7	AB008179|Pcdha7|12939|protocadherin alpha 7	EU854476|Pcdha7|12939|protocadherin alpha 7
mm9_v1_chr2_-_155340538_155340581	0.530314	FOX{C1,C2}.p2	BC005772|Ggt7|207182|gamma-glutamyltransferase 7	AK032051|Ggt7|207182|gamma-glutamyltransferase 7	NM_144786|Ggt7|207182|gamma-glutamyltransferase 7
mm9_v1_chr5_-_97885939_97886039	0.519867	FOX{C1,C2}.p2	AK075761|Gk2|14626|glycerol kinase 2	BC061147|Gk2|14626|glycerol kinase 2	AF117734|Gk2|14626|glycerol kinase 2	NM_010294|Gk2|14626|glycerol kinase 2	BC050764|Gk2|14626|glycerol kinase 2
mm9_v1_chr2_-_132706580_132706636	0.515571	FOX{C1,C2}.p2	AY325108|Lrrn4|320974|leucine rich repeat neuronal 4	AK080889|Lrrn4|320974|leucine rich repeat neuronal 4	NM_177303|Lrrn4|320974|leucine rich repeat neuronal 4	AK085246|Lrrn4|320974|leucine rich repeat neuronal 4
mm9_v1_chr9_+_59465036_59465209	0.508855	FOX{C1,C2}.p2	NM_029922|Parp6|67287|poly (ADP-ribose) polymerase family, member 6	BC052064|Parp6|67287|poly (ADP-ribose) polymerase family, member 6	AK076321|Parp6|67287|poly (ADP-ribose) polymerase family, member 6	AK007206|Parp6|67287|poly (ADP-ribose) polymerase family, member 6	AK035349|Parp6|67287|poly (ADP-ribose) polymerase family, member 6	AK021076|Parp6|67287|poly (ADP-ribose) polymerase family, member 6
mm9_v1_chr3_+_102824510_102824537	0.501079	FOX{C1,C2}.p2	AK146586|Csde1|229663|cold shock domain containing E1, RNA binding	AK147012|Csde1|229663|cold shock domain containing E1, RNA binding	AK151723|Csde1|229663|cold shock domain containing E1, RNA binding	AK151970|Csde1|229663|cold shock domain containing E1, RNA binding	AK144097|Csde1|229663|cold shock domain containing E1, RNA binding	BC029688|Csde1|229663|cold shock domain containing E1, RNA binding	AK151638|Csde1|229663|cold shock domain containing E1, RNA binding	AK152531|Csde1|229663|cold shock domain containing E1, RNA binding	AK168556|Csde1|229663|cold shock domain containing E1, RNA binding	AK159258|Csde1|229663|cold shock domain containing E1, RNA binding	AK159863|Csde1|229663|cold shock domain containing E1, RNA binding	AK146706|Csde1|229663|cold shock domain containing E1, RNA binding
mm9_v1_chr6_+_55153376_55153497	0.492727	FOX{C1,C2}.p2	AK082855|Fam188b|330323|family with sequence similarity 188, member B	NM_001142781|Fam188b|330323|family with sequence similarity 188, member B	NM_177883|Fam188b|330323|family with sequence similarity 188, member B	BC118939|Fam188b|330323|family with sequence similarity 188, member B	BC118940|Fam188b|330323|family with sequence similarity 188, member B	AK142385|Fam188b|330323|family with sequence similarity 188, member B	AK161304|Fam188b|330323|family with sequence similarity 188, member B
mm9_v1_chr11_+_58777282_58777303	0.488834	FOX{C1,C2}.p2	BC055112|Trim17|56631|tripartite motif-containing 17	NM_031172|Trim17|56631|tripartite motif-containing 17	AK077212|Trim17|56631|tripartite motif-containing 17
mm9_v1_chr3_+_102824539_102824560	0.487068	FOX{C1,C2}.p2	AK154068|Csde1|229663|cold shock domain containing E1, RNA binding	AK155751|Csde1|229663|cold shock domain containing E1, RNA binding	AK145428|Csde1|229663|cold shock domain containing E1, RNA binding	AK145932|Csde1|229663|cold shock domain containing E1, RNA binding	AK150882|Csde1|229663|cold shock domain containing E1, RNA binding	AK153196|Csde1|229663|cold shock domain containing E1, RNA binding	BC062097|Csde1|229663|cold shock domain containing E1, RNA binding	AK122393|Csde1|229663|cold shock domain containing E1, RNA binding	AK189439|Csde1|229663|cold shock domain containing E1, RNA binding	BC031404|Csde1|229663|cold shock domain containing E1, RNA binding
mm9_v1_chr1_+_90062617_90062631	0.482518	FOX{C1,C2}.p2	AB094481|Ugt1a5|394433|UDP glucuronosyltransferase 1 family, polypeptide A5
mm9_v1_chr4_-_129291500_129291511	0.471134	FOX{C1,C2}.p2	NM_001195730|Dcdc2b|667452|doublecortin domain containing 2b	AK086820|Dcdc2b|667452|doublecortin domain containing 2b
mm9_v1_chr11_+_83664370_83664376	0.46671	FOX{C1,C2}.p2	AK004837|Hnf1b|21410|HNF1 homeobox B	NM_009330|Hnf1b|21410|HNF1 homeobox B
mm9_v1_chr4_-_136891931_136891995	0.4633	FOX{C1,C2}.p2	AK213611|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	M79301|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	L11318|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	L78075|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)
mm9_v1_chr2_+_174171525_174171529	0.462415	FOX{C1,C2}.p2	AK187312|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK215851|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr13_+_55802874_55802961	0.457271	FOX{C1,C2}.p2	BC006718|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene
mm9_v1_chr7_-_118226462_118226512	0.447621	FOX{C1,C2}.p2	U63323|Eif4g2|13690|eukaryotic translation initiation factor 4, gamma 2	BC092521|Eif4g2|13690|eukaryotic translation initiation factor 4, gamma 2	BC056387|Eif4g2|13690|eukaryotic translation initiation factor 4, gamma 2
mm9_v1_chr9_+_103014374_103014418	0.438205	FOX{C1,C2}.p2	BC060618|Rab6b|270192|RAB6B, member RAS oncogene family	NM_173781|Rab6b|270192|RAB6B, member RAS oncogene family
mm9_v1_chr9_+_7692110_7692113	0.43307	FOX{C1,C2}.p2	BC119057|Mmp7|17393|matrix metallopeptidase 7	BC120655|Mmp7|17393|matrix metallopeptidase 7	NM_010810|Mmp7|17393|matrix metallopeptidase 7
mm9_v1_chr19_-_7369859_7369936	0.429313	FOX{C1,C2}.p2	AK172664|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	NM_001080390|Mark2|13728|MAP/microtubule affinity-regulating kinase 2	AK154864|Mark2|13728|MAP/microtubule affinity-regulating kinase 2
mm9_v1_chr18_-_31476721_31476786	0.421374	FOX{C1,C2}.p2	U71202|Rit2|19762|Ras-like without CAAX 2	AK162953|Rit2|19762|Ras-like without CAAX 2	AK040743|Rit2|19762|Ras-like without CAAX 2	AK041418|Rit2|19762|Ras-like without CAAX 2	BC018267|Rit2|19762|Ras-like without CAAX 2	NM_009065|Rit2|19762|Ras-like without CAAX 2	AK140726|Rit2|19762|Ras-like without CAAX 2
mm9_v1_chr7_+_121889279_121889421	0.410014	FOX{C1,C2}.p2	NM_173767|Insc|233752|inscuteable homolog (Drosophila)	AK188559|Insc|233752|inscuteable homolog (Drosophila)
mm9_v1_chr18_-_20273110_20273273	0.406876	FOX{C1,C2}.p2	BC109161|Dsc1|13505|desmocollin 1	BC109162|Dsc1|13505|desmocollin 1	AK036893|Dsc1|13505|desmocollin 1	AK081826|Dsc1|13505|desmocollin 1	X97986|Dsc1|13505|desmocollin 1	AK079441|Dsc1|13505|desmocollin 1	NM_013504|Dsc1|13505|desmocollin 1
mm9_v1_chr10_+_20672352_20672469	0.400223	FOX{C1,C2}.p2	AK080373|Ahi1|52906|Abelson helper integration site 1	NM_026203|Ahi1|52906|Abelson helper integration site 1	AK005991|Ahi1|52906|Abelson helper integration site 1	AK013997|Ahi1|52906|Abelson helper integration site 1	AK019416|Ahi1|52906|Abelson helper integration site 1	BC106130|Ahi1|52906|Abelson helper integration site 1	BC065146|Ahi1|52906|Abelson helper integration site 1	AK036336|Ahi1|52906|Abelson helper integration site 1	AY133241|Ahi1|52906|Abelson helper integration site 1
mm9_v1_chr4_+_134481298_134481299	0.399176	FOX{C1,C2}.p2	
mm9_v1_chr2_-_164419070_164419093	0.398606	FOX{C1,C2}.p2	AK006296|Spinlw1|75526|serine protease inhibitor-like, with Kunitz and WAP domains 1 (eppin)	NM_029325|Spinlw1|75526|serine protease inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF346413|Spinlw1|75526|serine protease inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC048637|Spinlw1|75526|serine protease inhibitor-like, with Kunitz and WAP domains 1 (eppin)
mm9_v1_chr10_+_80657435_80657438	0.394722	FOX{C1,C2}.p2	AK084504|2310050B05Rik|69678|RIKEN cDNA 2310050B05 gene	AK136697|2310050B05Rik|69678|RIKEN cDNA 2310050B05 gene	AK009897|2310050B05Rik|69678|RIKEN cDNA 2310050B05 gene	AK033837|2310050B05Rik|69678|RIKEN cDNA 2310050B05 gene
mm9_v1_chr15_+_94459521_94459680	0.383939	FOX{C1,C2}.p2	AK047437|Tmem117|320709|transmembrane protein 117	NM_178789|Tmem117|320709|transmembrane protein 117	AK048597|Tmem117|320709|transmembrane protein 117	AK034024|Tmem117|320709|transmembrane protein 117	BC051178|Tmem117|320709|transmembrane protein 117	BC054070|Tmem117|320709|transmembrane protein 117
mm9_v1_chr3_-_88576415_88576522	0.383206	FOX{C1,C2}.p2	AK158745|Syt11|229521|synaptotagmin XI	AK144169|Syt11|229521|synaptotagmin XI	AK164082|Syt11|229521|synaptotagmin XI	BC054526|Syt11|229521|synaptotagmin XI	AK164368|Syt11|229521|synaptotagmin XI	NM_018804|Syt11|229521|synaptotagmin XI
mm9_v1_chr1_-_24012436_24012480	0.380261	FOX{C1,C2}.p2	AK003789|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	BC028981|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	AK004301|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	AK007909|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	AK015824|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	NM_026503|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene
mm9_v1_chrX_-_61530035_61530158	0.373312	FOX{C1,C2}.p2	BC117890|Slitrk4|245446|SLIT and NTRK-like family, member 4	BC117891|Slitrk4|245446|SLIT and NTRK-like family, member 4	AK046301|Slitrk4|245446|SLIT and NTRK-like family, member 4	AK039763|Slitrk4|245446|SLIT and NTRK-like family, member 4	AK032263|Slitrk4|245446|SLIT and NTRK-like family, member 4
mm9_v1_chr11_-_96688959_96689060	0.348408	FOX{C1,C2}.p2	BC047283|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	AF071084|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1	X78709|Nfe2l1|18023|nuclear factor, erythroid derived 2,-like 1
mm9_v1_chrX_-_16896428_16896493	0.342622	FOX{C1,C2}.p2	BC120659|Efhc2|74405|EF-hand domain (C-terminal) containing 2	BC125625|Efhc2|74405|EF-hand domain (C-terminal) containing 2	AK016714|Efhc2|74405|EF-hand domain (C-terminal) containing 2	AK029501|Efhc2|74405|EF-hand domain (C-terminal) containing 2	NM_028916|Efhc2|74405|EF-hand domain (C-terminal) containing 2
mm9_v1_chr7_+_119253816_119253899	0.336535	FOX{C1,C2}.p2	AK015683|Usp47|74996|ubiquitin specific peptidase 47
mm9_v1_chr3_+_102824561_102824586	0.331448	FOX{C1,C2}.p2	AK145351|Csde1|229663|cold shock domain containing E1, RNA binding
mm9_v1_chr2_+_151368197_151368330	0.329771	FOX{C1,C2}.p2	NM_008019|Fkbp1a|14225|FK506 binding protein 1a	AK019362|Fkbp1a|14225|FK506 binding protein 1a	AK010693|Fkbp1a|14225|FK506 binding protein 1a	AK145400|Fkbp1a|14225|FK506 binding protein 1a	AK169242|Fkbp1a|14225|FK506 binding protein 1a	AK141261|Fkbp1a|14225|FK506 binding protein 1a	AK168333|Fkbp1a|14225|FK506 binding protein 1a
mm9_v1_chr2_-_164410650_164410676	0.3266	FOX{C1,C2}.p2	BC147597|Wfdc6a|209351|WAP four-disulfide core domain 6A	BC147615|Wfdc6a|209351|WAP four-disulfide core domain 6A	AK136589|Wfdc6a|209351|WAP four-disulfide core domain 6A	NM_001177848|Wfdc6a|209351|WAP four-disulfide core domain 6A
mm9_v1_chr13_+_91881065_91881204	0.324628	FOX{C1,C2}.p2	AK034622|Acot12|74156|acyl-CoA thioesterase 12	AK004905|Acot12|74156|acyl-CoA thioesterase 12	AK033663|Acot12|74156|acyl-CoA thioesterase 12	NM_028790|Acot12|74156|acyl-CoA thioesterase 12	AB078618|Acot12|74156|acyl-CoA thioesterase 12	BC025852|Acot12|74156|acyl-CoA thioesterase 12
mm9_v1_chr3_+_40698182_40698266	0.317419	FOX{C1,C2}.p2	AK028580|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	AK014120|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	AK019438|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	AK031032|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	AK169375|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	NM_026622|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	BC051081|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene	BC011312|3110057O12Rik|269423|RIKEN cDNA 3110057O12 gene
mm9_v1_chr19_+_53214934_53215104	0.315137	FOX{C1,C2}.p2	NM_001164099|Add3|27360|adducin 3 (gamma)	NM_001164101|Add3|27360|adducin 3 (gamma)	AK019491|Add3|27360|adducin 3 (gamma)	AK028481|Add3|27360|adducin 3 (gamma)	AK083939|Add3|27360|adducin 3 (gamma)	BC029196|Add3|27360|adducin 3 (gamma)	AK035151|Add3|27360|adducin 3 (gamma)
mm9_v1_chr7_+_53289198_53289316	0.309411	FOX{C1,C2}.p2	AK080754|Nomo1|211548|nodal modulator 1	AK082963|Nomo1|211548|nodal modulator 1	AK165643|Nomo1|211548|nodal modulator 1
mm9_v1_chr5_+_136254474_136254576	0.285061	FOX{C1,C2}.p2	AK002305|Mdh2|17448|malate dehydrogenase 2, NAD (mitochondrial)	AK135162|Mdh2|17448|malate dehydrogenase 2, NAD (mitochondrial)	BC023482|Mdh2|17448|malate dehydrogenase 2, NAD (mitochondrial)	NM_008617|Mdh2|17448|malate dehydrogenase 2, NAD (mitochondrial)	AK160553|Mdh2|17448|malate dehydrogenase 2, NAD (mitochondrial)	AK167809|Mdh2|17448|malate dehydrogenase 2, NAD (mitochondrial)	M16229|Mdh2|17448|malate dehydrogenase 2, NAD (mitochondrial)
mm9_v1_chr6_+_34813131_34813171	0.277405	FOX{C1,C2}.p2	AK030532|Tmem140|68487|transmembrane protein 140	AK165621|Tmem140|68487|transmembrane protein 140	NM_197986|Tmem140|68487|transmembrane protein 140	BC023802|Tmem140|68487|transmembrane protein 140
mm9_v1_chr1_+_90062550_90062608	0.276001	FOX{C1,C2}.p2	AY227196|Ugt1a5|394433|UDP glucuronosyltransferase 1 family, polypeptide A5	NM_201643|Ugt1a5|394433|UDP glucuronosyltransferase 1 family, polypeptide A5	BC139093|Ugt1a5|394433|UDP glucuronosyltransferase 1 family, polypeptide A5	BC139094|Ugt1a5|394433|UDP glucuronosyltransferase 1 family, polypeptide A5
mm9_v1_chr15_-_102455489_102455515	0.269239	FOX{C1,C2}.p2	AK047901|Atf7|223922|activating transcription factor 7
mm9_v1_chr11_-_110112926_110113089	0.26598	FOX{C1,C2}.p2	BC132417|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	BC132419|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK053384|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AF498361|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK042934|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK018242|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	AK040652|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_001166556|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_001166557|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6	NM_147218|Abca6|76184|ATP-binding cassette, sub-family A (ABC1), member 6
mm9_v1_chr5_+_130263548_130263603	0.257466	FOX{C1,C2}.p2	AK199226|Gbas|14467|glioblastoma amplified sequence
mm9_v1_chr4_-_134081867_134082196	0.247331	FOX{C1,C2}.p2	AK196748|Fam54b|76824|family with sequence similarity 54, member B	AK205711|Fam54b|76824|family with sequence similarity 54, member B	AK194688|Fam54b|76824|family with sequence similarity 54, member B
mm9_v1_chr2_+_24132788_24133018	0.229115	FOX{C1,C2}.p2	AK008977|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK009741|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK076547|Il1f5|54450|interleukin 1 family, member 5 (delta)	NM_019451|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK010020|Il1f5|54450|interleukin 1 family, member 5 (delta)	AF200495|Il1f5|54450|interleukin 1 family, member 5 (delta)	AJ250429|Il1f5|54450|interleukin 1 family, member 5 (delta)	BC132600|Il1f5|54450|interleukin 1 family, member 5 (delta)	BC132602|Il1f5|54450|interleukin 1 family, member 5 (delta)	AF230378|Il1f5|54450|interleukin 1 family, member 5 (delta)
mm9_v1_chr15_+_78860623_78860757	0.228176	FOX{C1,C2}.p2	
mm9_v1_chr11_+_120358702_120358712	0.226138	FOX{C1,C2}.p2	
mm9_v1_chr7_-_148661022_148661034	0.223629	FOX{C1,C2}.p2	AK011021|Polr2l|66491|polymerase (RNA) II (DNA directed) polypeptide L	AK149137|Polr2l|66491|polymerase (RNA) II (DNA directed) polypeptide L	AK168159|Polr2l|66491|polymerase (RNA) II (DNA directed) polypeptide L
mm9_v1_chr19_+_56536148_56536166	0.222762	FOX{C1,C2}.p2	BC090250|9930023K05Rik|226245|RIKEN cDNA 9930023K05 gene
mm9_v1_chr5_+_88095232_88095257	0.222503	FOX{C1,C2}.p2	AK052808|Csn1s1|12990|casein alpha s1	AK085690|Csn1s1|12990|casein alpha s1	BC003859|Csn1s1|12990|casein alpha s1	BC006024|Csn1s1|12990|casein alpha s1	BC007192|Csn1s1|12990|casein alpha s1	BC008278|Csn1s1|12990|casein alpha s1	BC040246|Csn1s1|12990|casein alpha s1	NM_007784|Csn1s1|12990|casein alpha s1	BC002101|Csn1s1|12990|casein alpha s1
mm9_v1_chr12_-_86447380_86447380	0.219285	FOX{C1,C2}.p2	AK051700|Prox2|73422|prospero homeobox 2	NM_175198|Prox2|73422|prospero homeobox 2
mm9_v1_chr14_-_80061875_80061890	0.217516	FOX{C1,C2}.p2	BC045152|Lect1|16840|leukocyte cell derived chemotaxin 1	AK013975|Lect1|16840|leukocyte cell derived chemotaxin 1
mm9_v1_chr8_-_71613058_71613120	0.215348	FOX{C1,C2}.p2	BC027192|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1	BC031146|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1	NM_153054|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1
mm9_v1_chr2_-_150434141_150434304	0.201368	FOX{C1,C2}.p2	AK189217|2310001A20Rik|71881|RIKEN cDNA 2310001A20 gene	AK009057|2310001A20Rik|71881|RIKEN cDNA 2310001A20 gene	NM_027977|2310001A20Rik|71881|RIKEN cDNA 2310001A20 gene	BC055706|2310001A20Rik|71881|RIKEN cDNA 2310001A20 gene	AJ310638|2310001A20Rik|71881|RIKEN cDNA 2310001A20 gene	AK154266|2310001A20Rik|71881|RIKEN cDNA 2310001A20 gene
mm9_v1_chr4_-_25726753_25727001	0.198774	FOX{C1,C2}.p2	AB015426|Fut9|14348|fucosyltransferase 9	BC116874|Fut9|14348|fucosyltransferase 9	BC116876|Fut9|14348|fucosyltransferase 9	AK047650|Fut9|14348|fucosyltransferase 9	AK163871|Fut9|14348|fucosyltransferase 9	AK036183|Fut9|14348|fucosyltransferase 9	AK043410|Fut9|14348|fucosyltransferase 9	AK049167|Fut9|14348|fucosyltransferase 9
mm9_v1_chr12_-_79327460_79327480	0.197149	FOX{C1,C2}.p2	BC025195|Gphn|268566|gephyrin
mm9_v1_chr7_+_36182053_36182081	0.191699	FOX{C1,C2}.p2	BC003981|Ccdc123|72140|coiled-coil domain containing 123	AK029107|Ccdc123|72140|coiled-coil domain containing 123
mm9_v1_chr1_-_175157322_175157359	0.189393	FOX{C1,C2}.p2	BC125457|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	BC125455|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	BC145138|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	J05018|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide	NM_010184|Fcer1a|14125|Fc receptor, IgE, high affinity I, alpha polypeptide
mm9_v1_chr2_+_163519756_163519774	0.188585	FOX{C1,C2}.p2	NM_011106|Pkig|18769|protein kinase inhibitor, gamma	U97170|Pkig|18769|protein kinase inhibitor, gamma
mm9_v1_chr7_-_31514525_31514525	0.184121	FOX{C1,C2}.p2	BC035323|Tmem147|69804|transmembrane protein 147
mm9_v1_chr10_+_79422870_79422988	0.181631	FOX{C1,C2}.p2	AK087505|Wdr18|216156|WD repeat domain 18	AK133716|Wdr18|216156|WD repeat domain 18	BC095984|Wdr18|216156|WD repeat domain 18	NM_175450|Wdr18|216156|WD repeat domain 18	AK032251|Wdr18|216156|WD repeat domain 18	AK050106|Wdr18|216156|WD repeat domain 18	AK160713|Wdr18|216156|WD repeat domain 18	AK163465|Wdr18|216156|WD repeat domain 18	AK166113|Wdr18|216156|WD repeat domain 18	AK168691|Wdr18|216156|WD repeat domain 18	AK082695|Wdr18|216156|WD repeat domain 18
mm9_v1_chr8_+_4226826_4226911	0.174312	FOX{C1,C2}.p2	BC080783|Lrrc8e|72267|leucine rich repeat containing 8 family, member E	NM_028175|Lrrc8e|72267|leucine rich repeat containing 8 family, member E	AK007851|Lrrc8e|72267|leucine rich repeat containing 8 family, member E
mm9_v1_chrY_-_1976583_1976583	0.169197	FOX{C1,C2}.p2	EU315689|Gm6026|547210|predicted gene 6026	NM_001113395|Gm16501|100042840|predicted gene 16501	NM_001177569|Gm6026|547210|predicted gene 6026
mm9_v1_chr8_+_97191005_97191005	0.166031	FOX{C1,C2}.p2	AK006418|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	AK006646|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein	NM_024269|Arl2bp|107566|ADP-ribosylation factor-like 2 binding protein
mm9_v1_chr11_+_74743743_74743795	0.165104	FOX{C1,C2}.p2	AK129203|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm9_v1_chr15_+_18750083_18750083	0.152265	FOX{C1,C2}.p2	AK138606|Cdh10|320873|cadherin 10	NM_009865|Cdh10|320873|cadherin 10
mm9_v1_chr12_+_4134152_4134180	0.148891	FOX{C1,C2}.p2	NM_138305|Adcy3|104111|adenylate cyclase 3	AF458089|Adcy3|104111|adenylate cyclase 3
mm9_v1_chr4_+_40090297_40090416	0.143584	FOX{C1,C2}.p2	NM_007386|Aco1|11428|aconitase 1
mm9_v1_chr18_+_58819093_58819192	0.140718	FOX{C1,C2}.p2	AK165542|Isoc1|66307|isochorismatase domain containing 1	BC016576|Isoc1|66307|isochorismatase domain containing 1	AY035213|Isoc1|66307|isochorismatase domain containing 1	NM_025478|Isoc1|66307|isochorismatase domain containing 1	AK134794|Isoc1|66307|isochorismatase domain containing 1	AK152763|Isoc1|66307|isochorismatase domain containing 1	AK153257|Isoc1|66307|isochorismatase domain containing 1
mm9_v1_chr16_+_45159173_45159221	0.138908	FOX{C1,C2}.p2	AB079386|Atg3|67841|autophagy-related 3 (yeast)
mm9_v1_chr3_-_141645214_141645214	0.137109	FOX{C1,C2}.p2	BC065143|Bmpr1b|12167|bone morphogenetic protein receptor, type 1B	NM_007560|Bmpr1b|12167|bone morphogenetic protein receptor, type 1B
mm9_v1_chr9_+_27204405_27204405	0.134083	FOX{C1,C2}.p2	AB120716|Spata19|75469|spermatogenesis associated 19	AK005610|Spata19|75469|spermatogenesis associated 19	NM_029299|Spata19|75469|spermatogenesis associated 19
mm9_v1_chr3_+_120994646_120994734	0.132632	FOX{C1,C2}.p2	AK011733|Alg14|66789|asparagine-linked glycosylation 14 homolog (yeast)	BC002278|Alg14|66789|asparagine-linked glycosylation 14 homolog (yeast)	NM_024178|Alg14|66789|asparagine-linked glycosylation 14 homolog (yeast)
mm9_v1_chr1_-_174825081_174825085	0.126229	FOX{C1,C2}.p2	BC061125|Apcs|20219|serum amyloid P-component
mm9_v1_chr3_+_106524842_106524867	0.121696	FOX{C1,C2}.p2	AK156488|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	AK008209|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	AK141379|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	BC117763|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	BC117764|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	AK048030|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene	BC094643|4933421E11Rik|321000|RIKEN cDNA 4933421E11 gene
mm9_v1_chr1_+_121903556_121903630	0.121635	FOX{C1,C2}.p2	AK032652|Sctr|319229|secretin receptor	NM_001012322|Sctr|319229|secretin receptor	BC089355|Sctr|319229|secretin receptor
mm9_v1_chr7_-_31514445_31514522	0.11697	FOX{C1,C2}.p2	AK008089|Tmem147|69804|transmembrane protein 147	AK007753|Tmem147|69804|transmembrane protein 147	BC147300|Tmem147|69804|transmembrane protein 147	BC147301|Tmem147|69804|transmembrane protein 147
mm9_v1_chr1_+_180168023_180168042	0.112197	FOX{C1,C2}.p2	AK216786|Pppde1|78825|PPPDE peptidase domain containing 1
mm9_v1_chr7_+_52810297_52810297	0.106662	FOX{C1,C2}.p2	NM_025330|Hsd17b14|66065|hydroxysteroid (17-beta) dehydrogenase 14
mm9_v1_chr6_-_127059521_127059603	0.105885	FOX{C1,C2}.p2	AK163290|9630033F20Rik|319801|RIKEN cDNA 9630033F20 gene	AK145896|9630033F20Rik|319801|RIKEN cDNA 9630033F20 gene	AK036082|9630033F20Rik|319801|RIKEN cDNA 9630033F20 gene	AK078900|9630033F20Rik|319801|RIKEN cDNA 9630033F20 gene	BC147705|9630033F20Rik|319801|RIKEN cDNA 9630033F20 gene	BC147718|9630033F20Rik|319801|RIKEN cDNA 9630033F20 gene	AK165614|9630033F20Rik|319801|RIKEN cDNA 9630033F20 gene	NM_177003|9630033F20Rik|319801|RIKEN cDNA 9630033F20 gene
mm9_v1_chr9_-_52484889_52484906	0.0999939	FOX{C1,C2}.p2	AK053489|AI593442|330941|expressed sequence AI593442
mm9_v1_chr8_-_25686797_25686823	0.0968413	FOX{C1,C2}.p2	BC026393|Ido2|209176|indoleamine 2,3-dioxygenase 2	EF137182|Ido2|209176|indoleamine 2,3-dioxygenase 2	NM_145949|Ido2|209176|indoleamine 2,3-dioxygenase 2
mm9_v1_chr4_+_100151471_100151479	0.094938	FOX{C1,C2}.p2	AK133379|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)	NM_001033773|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)	BC150880|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)	BC150888|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)	BC172031|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)
mm9_v1_chr2_+_14096150_14096167	0.0916897	FOX{C1,C2}.p2	AK144489|Fam23a|625286|family with sequence similarity 23, member A	NM_001081310|Fam23a|625286|family with sequence similarity 23, member A
mm9_v1_chr3_-_88636411_88636470	0.0910081	FOX{C1,C2}.p2	AK141588|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK014401|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK033977|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene	AK078122|1500004A13Rik|319830|RIKEN cDNA 1500004A13 gene
mm9_v1_chr7_+_114352958_114352958	0.0852806	FOX{C1,C2}.p2	AK005907|Rbmxl2|76572|RNA binding motif protein, X-linked-like 2	NM_029660|Rbmxl2|76572|RNA binding motif protein, X-linked-like 2
mm9_v1_chr7_-_91558468_91558528	0.0790669	FOX{C1,C2}.p2	BC054546|Arnt2|11864|aryl hydrocarbon receptor nuclear translocator 2	NM_007488|Arnt2|11864|aryl hydrocarbon receptor nuclear translocator 2
mm9_v1_chr15_+_38148957_38148957	0.0769474	FOX{C1,C2}.p2	BC145758|Odf1|18285|outer dense fiber of sperm tails 1	EU791469|Odf1|18285|outer dense fiber of sperm tails 1	NM_008757|Odf1|18285|outer dense fiber of sperm tails 1	X79446|Odf1|18285|outer dense fiber of sperm tails 1
mm9_v1_chr15_-_100518324_100518351	0.0765034	FOX{C1,C2}.p2	BC011218|Cela1|109901|chymotrypsin-like elastase family, member 1	AK007931|Cela1|109901|chymotrypsin-like elastase family, member 1	AK007392|Cela1|109901|chymotrypsin-like elastase family, member 1	NM_033612|Cela1|109901|chymotrypsin-like elastase family, member 1
mm9_v1_chr1_+_179659944_179659944	0.0652049	FOX{C1,C2}.p2	AK006014|1700016C15Rik|69428|RIKEN cDNA 1700016C15 gene	NM_027077|1700016C15Rik|69428|RIKEN cDNA 1700016C15 gene
mm9_v1_chrY_+_1855008_1855008	0.0627855	FOX{C1,C2}.p2	EU315689|Gm6026|547210|predicted gene 6026	NM_001113395|Gm16501|100042840|predicted gene 16501	NM_001177569|Gm6026|547210|predicted gene 6026
mm9_v1_chr14_+_70008874_70008979	0.0612931	FOX{C1,C2}.p2	BC086801|Loxl2|94352|lysyl oxidase-like 2	AK145323|Loxl2|94352|lysyl oxidase-like 2	AK034957|Loxl2|94352|lysyl oxidase-like 2	AK159386|Loxl2|94352|lysyl oxidase-like 2
mm9_v1_chr13_-_94269673_94269706	0.0495154	FOX{C1,C2}.p2	BC020052|Jmy|57748|junction-mediating and regulatory protein
mm9_v1_chr9_-_50910070_50910182	0.0462012	FOX{C1,C2}.p2	AK014780|4833427G06Rik|235345|RIKEN cDNA 4833427G06 gene	AK132837|4833427G06Rik|235345|RIKEN cDNA 4833427G06 gene	BC048587|4833427G06Rik|235345|RIKEN cDNA 4833427G06 gene	NM_177702|4833427G06Rik|235345|RIKEN cDNA 4833427G06 gene
mm9_v1_chr18_+_37089837_37089938	0.0446592	FOX{C1,C2}.p2	BC082326|Pcdha1|116731|protocadherin alpha 1	AY013756|Pcdha1|116731|protocadherin alpha 1	NM_054072|Pcdha1|116731|protocadherin alpha 1
mm9_v1_chr5_+_24728685_24728824	0.0284153	FOX{C1,C2}.p2	NM_144908|Galnt11|231050|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	BC021504|Galnt11|231050|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	AK088014|Galnt11|231050|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	AK084596|Galnt11|231050|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	BC011428|Galnt11|231050|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	AK079811|Galnt11|231050|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11
mm9_v1_chr8_+_115093942_115094124	0.0246444	FOX{C1,C2}.p2	BC034628|Cntnap4|170571|contactin associated protein-like 4	NM_130457|Cntnap4|170571|contactin associated protein-like 4	AK142816|Cntnap4|170571|contactin associated protein-like 4	AK081891|Cntnap4|170571|contactin associated protein-like 4	AK053611|Cntnap4|170571|contactin associated protein-like 4	AK042607|Cntnap4|170571|contactin associated protein-like 4	AK173255|Cntnap4|170571|contactin associated protein-like 4	AF333770|Cntnap4|170571|contactin associated protein-like 4
mm9_v1_chr1_-_42749940_42749978	0.0215994	FOX{C1,C2}.p2	BC059892|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene	BC058417|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene
mm9_v1_chr11_-_90499370_90499421	0.0211569	FOX{C1,C2}.p2	BC032881|Stxbp4|20913|syntaxin binding protein 4	AK012293|Stxbp4|20913|syntaxin binding protein 4	AK032998|Stxbp4|20913|syntaxin binding protein 4	AK049001|Stxbp4|20913|syntaxin binding protein 4	NM_011505|Stxbp4|20913|syntaxin binding protein 4
mm9_v1_chr18_+_37637421_37637642	0.0202957	FOX{C1,C2}.p2	NM_053141|Pcdhb16|93887|protocadherin beta 16	AK030612|Pcdhb16|93887|protocadherin beta 16	AK036829|Pcdhb16|93887|protocadherin beta 16	BC115720|Pcdhb16|93887|protocadherin beta 16	BC116625|Pcdhb16|93887|protocadherin beta 16	AY013777|Pcdhb16|93887|protocadherin beta 16
mm9_v1_chr7_+_36234110_36234197	0.0167789	FOX{C1,C2}.p2	AF192310|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	NM_001199015|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	AK142541|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	NM_001199016|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	AK164714|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	BC010746|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	AJ249198|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	NM_021291|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9
mm9_v1_chr10_+_84300892_84300904	0.0113224	FOX{C1,C2}.p2	AB089184|Rfx4|71137|regulatory factor X, 4 (influences HLA class II expression)	AK016791|Rfx4|71137|regulatory factor X, 4 (influences HLA class II expression)	NM_027689|Rfx4|71137|regulatory factor X, 4 (influences HLA class II expression)	BC138719|Rfx4|71137|regulatory factor X, 4 (influences HLA class II expression)	BC138720|Rfx4|71137|regulatory factor X, 4 (influences HLA class II expression)
mm9_v1_chr9_+_103014445_103014461	0.00833936	FOX{C1,C2}.p2	AK035893|Rab6b|270192|RAB6B, member RAS oncogene family
mm9_v1_chr3_+_89251875_89251915	0.00802932	FOX{C1,C2}.p2	AK189297|Pbxip1|229534|pre-B-cell leukemia transcription factor interacting protein 1
mm9_v1_chr3_+_33707638_33707720	0.00679056	FOX{C1,C2}.p2	AK016428|Ttc14|67120|tetratricopeptide repeat domain 14	BC103802|Ttc14|67120|tetratricopeptide repeat domain 14
mm9_v1_chr3_-_72861724_72861729	0.004349	FOX{C1,C2}.p2	AK158856|Slitrk3|386750|SLIT and NTRK-like family, member 3
